Limnohabitans sp. 63ED37-2: L63ED372_00452
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Entry
L63ED372_00452 CDS
T04121
Symbol
fadD_1
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
lih
Limnohabitans sp. 63ED37-2
Pathway
lih00061
Fatty acid biosynthesis
lih00071
Fatty acid degradation
lih01100
Metabolic pathways
lih01212
Fatty acid metabolism
lih02024
Quorum sensing
lih04146
Peroxisome
Module
lih_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
lih00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
L63ED372_00452 (fadD_1)
00071 Fatty acid degradation
L63ED372_00452 (fadD_1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
L63ED372_00452 (fadD_1)
09145 Cellular community - prokaryotes
02024 Quorum sensing
L63ED372_00452 (fadD_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
lih01004
]
L63ED372_00452 (fadD_1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lih04147
]
L63ED372_00452 (fadD_1)
Enzymes [BR:
lih01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
L63ED372_00452 (fadD_1)
Lipid biosynthesis proteins [BR:
lih01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
L63ED372_00452 (fadD_1)
Exosome [BR:
lih04147
]
Exosomal proteins
Exosomal proteins of breast milk
L63ED372_00452 (fadD_1)
Exosomal proteins of breast cancer cells
L63ED372_00452 (fadD_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ALK87679
UniProt:
A0A0P0M7H5
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All DBs
Position
476624..478387
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AA seq
587 aa
AA seq
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MSLTPDPTSAVRPWQAVYPQVGIAPVLPAPEHQSLAHLIHDHCVRWARDSQAKAAFTCVV
PNGMNGSLSFAQVDALSDAFAGYLRGTLGLARGDRVAVQLPNSLPYPVVAFGVLKAGCVL
VNTNPLYTVSEMVHQFNNSQAKALVVVDMFADKLPEVLAKTGVKHIVLAGVPEFFPAIPR
GIIRGVQKVWSKVLPPVTVPHVRLQAALAQGRATLAQQPARGYWQDLQPHDLALLQYTGG
TTGVSKGAMISHGNLLRNVQQMLAMGSTHMTPGQECVLTALPLYHIFAFTANLLGFLAIG
AHNILVPSPRPVQNLQRAVENYPLTWMTGVNTLFNGLLNEEWFLAYPPKHLKASIAGGTA
LHSAVAQRWREVTGTPIAEGYGLTETSPVVSFNPLSGEPRVGSIGIPAPGTDVRLVSEAG
QDVPVGEPGEIWVRGPQVMQGYWQNEAETAKAMQDGWFATGDIGVMDAEGFFRIVDRKKD
MVLVSGFNVYPNEVEDVIAQMDAVLEVAVVGTPDERTGEAVRAYVVPNPDHAGQLRTEDV
LAHCKQHLAAYKRPSSVVLRDELPKSPIGKVLRKDLKAEVKNEFKRA
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgaccccagaccccacgagcgccgtgcgcccgtggcaagcggtttacccccaa
gtgggcattgccccagttttgcctgcgcccgaacaccagagcctggcgcatttgatccac
gaccactgcgtccgctgggcgcgtgacagccaagccaaggcggctttcacttgtgtggtg
cccaacggcatgaacggcagtttgagttttgcgcaggtggatgctttgtcggacgcgttt
gcaggctacctgcgtggtactttgggtttggcccggggcgaccgtgtggcggtgcagttg
cccaacagcctgccctatccggtggtggcttttggtgtgctcaaggctgggtgtgtgctg
gtcaacaccaacccgctctataccgtgagcgaaatggtgcaccagttcaacaacagccag
gccaaggccttggtggtggtcgacatgtttgccgacaagttgcccgaggtgctggcgaaa
acaggtgtgaaacacattgtgctggcaggcgtgcccgagttttttccggcgattccgcgc
ggcatcatccgcggcgtgcaaaaggtttggagcaaagtgctgccgcctgtgacggtgcca
cacgtgcgcctgcaggcagccctggcccagggccgcgccacgttggcccagcagcctgcc
aggggctattggcaagatttgcagccacacgatttggccttgctgcaatacaccgggggc
accacgggcgtgagcaagggcgcgatgatcagtcacggtaatttgctgcgcaacgtgcag
cagatgctggccatgggctcgacccacatgacccccggccaagagtgcgtgctgacggcg
ctgccgctgtaccacatcttcgcgttcacggccaatttgctgggcttcctggccatcggt
gcgcacaatattttggtgcccagcccgcgcccagtgcaaaacctgcaacgcgctgtcgaa
aactacccgctgacttggatgacgggtgtgaacaccttgttcaatggcctgctcaatgaa
gagtggtttttggcttacccgcccaagcacctgaaggcctcgatcgcaggcggcaccgcc
ttgcacagcgccgtggcccagcgctggcgcgaagtcaccggcacccccattgccgaaggt
tatggcctgaccgaaacatcgcctgtggtgagcttcaacccgctcagcggcgagccgcgt
gtgggcagcatcggcatccccgccccgggcaccgatgtgcgcttggtgtcggaagccggg
caagacgtgcccgtgggcgagcccggtgagatctgggtgcgcggcccccaggtcatgcaa
ggctattggcaaaacgaggccgaaaccgccaaggcgatgcaggacggttggtttgcgacg
ggtgacatcggggtgatggatgccgagggctttttccgcatcgtggatcgcaagaaagac
atggtgttggtctcgggcttcaacgtttatcccaacgaggtggaagatgtgatcgcgcag
atggatgcggtgttggaagtggcggtggtcggcacgcccgacgagcgcacgggcgaggcg
gttcgtgcttatgtggtgcccaaccccgaccatgcggggcagctgcgcaccgaagacgtg
ttggcgcactgcaaacaacacctggcggcctacaagcggcccagctcggtggtgttgcgc
gatgagttgcccaaatccccgattggcaaggtgctgcgcaaggacctgaaagccgaagtc
aaaaatgaattcaaacgggcctga
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