Limnohabitans sp. 63ED37-2: L63ED372_00504
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Entry
L63ED372_00504 CDS
T04121
Symbol
cmpR_1
Name
(GenBank) HTH-type transcriptional activator CmpR
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
lih
Limnohabitans sp. 63ED37-2
Brite
KEGG Orthology (KO) [BR:
lih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lih03000
]
L63ED372_00504 (cmpR_1)
Transcription factors [BR:
lih03000
]
Prokaryotic type
Helix-turn-helix
LysR family
L63ED372_00504 (cmpR_1)
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
SBP_bac_11
PBP_like
PBP_like_2
Motif
Other DBs
NCBI-ProteinID:
ALK87731
UniProt:
A0A0P0LBM8
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Position
complement(531745..532680)
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AA seq
311 aa
AA seq
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MKNATFRQLRVFNEVARHLSFVRAAENLHLTPPAVTMQVKELEGHVGMPLFDRKGKQVSL
TTTGEYMLVYARKILATVKDAEDAAARLQRAETGVLTIGFVSTAKYFLMRLLAEFRTLHP
GVDIQISIGNRDQLVGMLQNSEVDIAVMGRPPKELQTRAEPFAAHPHVFVSAVDHPLAHR
DHLRVEDLRPFDFIVREKGAGTRAAMEKFFEDTHVEPRMKIELHSNEIIKQAVMAGLGLG
FLSLHTIGLELEHKLICMLDVEGAPVVRSWNVVHTQSKMLSPAAEAFRYFMLEEAESHLA
QRFGMHWPKAA
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatgctaccttccgccaacttcgcgtgttcaacgaggtggctcgacatctgagc
tttgtgcgtgccgccgaaaacctgcacctcacaccgcccgccgtgactatgcaggtcaag
gaactcgaaggccacgtgggcatgcccctgtttgaccgcaaaggcaaacaagtgagcctg
accaccacgggcgagtacatgctggtttatgcccgcaaaattttggccacagtgaaagac
gctgaagacgctgcagcccgtttgcagcgggccgaaacaggcgtcctgaccatcggtttt
gtcagcaccgccaagtattttttgatgcgcttgctggccgaatttcgcacactgcaccca
ggtgtggacattcaaatctccatcggcaaccgtgaccaactggtcggcatgctgcaaaac
agcgaggtcgacattgccgtgatgggccgcccccccaaagagctgcaaacccgggccgag
ccctttgcggcgcacccgcatgtgtttgtctcagccgtggaccaccctctggcacatcgc
gaccacctgcgtgtggaagacctgcgacccttcgacttcatcgtgcgcgaaaagggggca
ggcacccgcgccgccatggaaaagttttttgaagacacacacgtcgagccgcgcatgaaa
atcgagctgcacagcaacgaaatcatcaagcaagctgtgatggcgggactgggcctgggc
tttttgtcgctgcacaccattggcttggagctggagcacaagctgatctgcatgctcgat
gtggaaggtgcgcccgtggtgcgctcatggaacgtggtgcacacccaatccaaaatgctc
tcgcctgcagccgaggcgtttcgctacttcatgctcgaagaagccgaaagccacctggcc
cagcgctttggcatgcactggcccaaggccgcctga
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