Limnohabitans sp. 63ED37-2: L63ED372_00505
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Entry
L63ED372_00505 CDS
T04121
Symbol
cmpR_2
Name
(GenBank) HTH-type transcriptional activator CmpR
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
lih
Limnohabitans sp. 63ED37-2
Brite
KEGG Orthology (KO) [BR:
lih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lih03000
]
L63ED372_00505 (cmpR_2)
Transcription factors [BR:
lih03000
]
Prokaryotic type
Helix-turn-helix
LysR family
L63ED372_00505 (cmpR_2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
HTH_30
HTH_20
HTH_28
HTH_Tnp_ISL3
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ALK87732
UniProt:
A0A0P0M7E2
LinkDB
All DBs
Position
complement(532721..533617)
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AA seq
298 aa
AA seq
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MNLRHATLHQLRIFQAVAEHNSFARAAEALHLSPPTLSLQVKQLAETVGQPLFEQLGKKI
FLTAAGKILAEACQDIARRMDLLSDDLAALQGVERGSLKIAILTTVKYTVPKLLGGFCAA
HPGIDVAMVVGNRENLLQRLSQNQDDLYIMGQPPEHMDVFCEAFADNPLVIVGPPTHALA
GKRRIRPERLRHEPFIMREPGSGTRLTMERFFSEHGVTPINRLELGSNEAIKKTVSGGLG
LAVLSASTLDAELALGELVQLDVMGFPLIRRWHLVYPRGKRQSPAALAFKAWLFEHRP
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgagacacgccaccttgcaccagctgcggatttttcaggccgtggccgaacac
aacagctttgcacgcgccgcagaggctttgcacctctcgcccccaactttgtcgttgcag
gtcaagcaactggctgaaaccgtggggcaacccttgtttgagcaactgggcaaaaagatt
tttctgacggccgcaggcaagatcctggccgaggcttgccaggacatcgcacggcgcatg
gacctgctcagcgatgacctggccgcgctgcaaggtgtagagcgcggcagcctgaaaatt
gccatcctcaccaccgtgaagtacaccgtgcccaaactgctgggcggcttttgcgcagca
caccccggtatcgacgtggccatggtggtgggcaaccgcgaaaacctgctccagcgtctg
tcgcaaaaccaggacgacctctacatcatgggccaaccccccgagcacatggacgtgttt
tgtgaagcctttgccgacaaccccttggtcattgtgggaccgcccacccacgcgctggcg
ggcaaacgccgcatccgcccggagcggctgcgccacgagcctttcatcatgcgcgagccc
ggttcgggcacgcgcttgaccatggagcggtttttcagtgaacacggcgtcacgcccatc
aaccggttagagctgggcagcaacgaggcgatcaaaaaaaccgtctctggcggcctgggg
ctggccgtgttgtcggcctccactctcgacgccgaattggctttgggcgagctggttcag
ctcgatgtcatgggcttcccactcatccggcgctggcacctggtctacccccgaggcaag
cgccagtctcctgcggccctggccttcaaggcctggttgtttgagcaccgtccataa
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