Limnohabitans sp. 63ED37-2: L63ED372_00613
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Entry
L63ED372_00613 CDS
T04121
Symbol
ycaO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase accessory factor YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
lih
Limnohabitans sp. 63ED37-2
Brite
KEGG Orthology (KO) [BR:
lih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lih03009
]
L63ED372_00613 (ycaO)
Ribosome biogenesis [BR:
lih03009
]
Prokaryotic type
ribosomal protein modification factors
L63ED372_00613 (ycaO)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
DUF6887
Motif
Other DBs
NCBI-ProteinID:
ALK87840
UniProt:
A0A0N7J8C9
LinkDB
All DBs
Position
648045..650258
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AA seq
737 aa
AA seq
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MEIKVNFLDKLRLEAKFDDFTVLADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCE
TRGISTEHIRLSQNNIVDPDNRYLQTIKIQVELPADMSDKDRLGILRSIDRCTVKKAIQA
GPTFIVEAVDNLDADAQALLSLNPDALAQTRIAGKDLPLEQTIANMTAVLANLGIKIEIA
SWRNLVPNVWSLHIRDAHSPMCFTNGKGSSKESALASALGEYIERLNNNHFYAGVFFGED
LAQADFVHDPRERWFPQGKRDALPKGLLDEHCLAIYNPDGELKASHLFDTNSGNTARGIC
ALPYVRQSDGEVVYFPSNLVENLFVSNGMSAGNTLVEAQVQCLSEIFERAVKREILEGEM
ALPDVPKDVLAKYPGIVAGIEALEAQGFPVLVKDASLGGVYPVMCVTLMNPRTGGVFASF
GAHPRLEVALERSLTELLQGRSFEGLNDLPAPTFISNAVTEPNNFVEHFIDSSGIVSWRF
FSAQADHEFVEWDFAGQGEDATAQEAATLFGILQAMGKEAYVTVHDQLGATACRILVPGY
SEVYPVDDLIWDNTNKALLFRADVLNLHRLDDEALEALLDRLENNELDDYLDVATLIGIE
FDDNTVWGQLTVMELKLLIHLALQQLEEAHELVGAFLQYNDNTVERRLFYQALNVVLEVT
LGEDLALEDYEVNFRRMFGQERMDAAIGSVDGSVRFYGLTPTSLQLEGLERHQRLLDSYK
KLHTARSRASAKQGSSA
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaagtcaattttctcgacaaactgcgcctggaggccaagtttgacgacttc
accgtgctggccgatcagcccattcgttacaagggcgatggctcggcgccggggccgttt
gattattttttggcgtcctcggctttgtgcgcggcgtattttgtgaagctgtattgcgag
acgcgcggcatctccaccgagcacattcgcctgtcgcaaaacaacatcgtggaccccgac
aaccgctacctgcagaccatcaagatccaggtggagttgccagccgacatgtccgacaaa
gaccggctcggcattttgcggtccatcgaccgctgcacggtcaaaaaggcgattcaagcg
ggtcctaccttcatcgtcgaagcggtggacaacctggacgccgacgcgcaggccttgctt
tctctgaaccccgatgcgctggcgcagacccgcattgcgggcaaagacttgccgttggag
cagaccatcgccaacatgacagcggtgttggcgaacttgggcatcaagatcgagatcgcg
tcttggcgcaacctggtgcccaatgtgtggtcgctgcacatccgcgacgcacattcgccc
atgtgcttcaccaacggcaagggttcgagcaaagagagcgccttggcctcggcgctgggc
gaatacatcgagcggctgaacaacaaccatttttacgcgggcgtgttttttggcgaagac
ctggcgcaagccgacttcgtgcacgacccccgcgagcgctggttcccgcagggcaagcgc
gacgcgctgcccaaaggcttgttggacgaacactgcttggccatttacaaccccgatggt
gagctcaaggcctcgcacctgttcgacaccaactccggcaacaccgcgcgtggcatttgt
gcgttgccctatgtgcgccagtccgatggtgaggtggtgtacttcccgtcgaacctggtg
gaaaacctgttcgtgagcaacggcatgagcgcgggcaacacgctggtcgaagcgcaggtg
cagtgcctgtcggagatttttgagcgggccgtcaagcgcgagatcctggaaggcgaaatg
gccttgcccgatgtgccgaaggatgtgctcgccaagtaccccggcatcgtggccggcatc
gaggccttggaagcgcagggcttcccggtcttggtcaaagacgcgtcgctgggtggtgtg
tacccggtgatgtgtgtgaccctgatgaacccgcgcacgggcggtgtgtttgcgtcgttt
ggtgcacatccgcgattggaagtggcgctggagcgcagcctgaccgagttgctgcagggc
cgcagttttgagggcctgaatgacttgcccgcgcccacgttcatcagcaacgccgtgacc
gagcccaacaactttgtggagcacttcattgactccagcggcatcgtgtcatggcggttt
ttcagcgcccaggccgaccacgagtttgtggagtgggactttgctgggcagggcgaagac
gccaccgcccaagaggctgccacgctgttcggcatcttgcaggccatgggcaaagaggct
tatgtgacggtgcacgaccaactcggcgccaccgcttgtcgcatcttggtccccggttat
tccgaggtctacccggtcgacgacctgatttgggacaacaccaacaaagcgctgttgttc
cgcgccgatgtactcaacctgcaccgcctggacgatgaggctttggaggcattgctcgac
cggttggagaacaacgaactggacgactacctcgacgtcgctaccctgatcggcatcgag
ttcgacgacaacacggtgtggggccagctcacggtgatggagctcaagctcttgatccac
ctggctttgcagcagctggaagaagcccacgaactggtgggcgctttcctgcaatacaac
gacaacaccgtagagcgccgcttgttttaccaagccttgaacgtggtgttggaagtcacg
ctgggcgaggacttggccctagaagactacgaggtgaatttccgccgcatgttcggccaa
gagcgcatggatgcagccatcggctcggtggacggcagcgtgcgtttttatggcctcacg
cccaccagcttgcagctggagggcctggagcggcaccagcgcttgctcgacagctacaaa
aagctgcacacggcgcgatcgcgtgcttcagccaagcagggcagttcagcttga
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