Limnohabitans sp. 63ED37-2: L63ED372_00625
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Entry
L63ED372_00625 CDS
T04121
Name
(GenBank) Farnesyl diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
lih
Limnohabitans sp. 63ED37-2
Pathway
lih00900
Terpenoid backbone biosynthesis
lih01100
Metabolic pathways
lih01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
lih00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
L63ED372_00625
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
lih01006
]
L63ED372_00625
Enzymes [BR:
lih01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
L63ED372_00625
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
L63ED372_00625
2.5.1.29 geranylgeranyl diphosphate synthase
L63ED372_00625
Prenyltransferases [BR:
lih01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
L63ED372_00625
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
ALK87852
UniProt:
A0A0P0LNS2
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All DBs
Position
661197..662111
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AA seq
304 aa
AA seq
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MSLLTRAEHALSSHFEQAAGVGAPSRLVAAMRHAVFSGGARIRPQLCMAVATACGDDAPE
LTNAAAVALELMHCASLVHDDMPAFDNADTRRGRPTVHKAFSEPLALLAGDGLIVMAYRV
LLQAGAQRPDRLIALMDNMTTGVGLPNGIVAGQAWECETSADLGQYQRAKTGALFVSATC
AGALSCGYEPEPWAPLGAYLGEAYQVADDIRDVIADAATLGKPAGQDALHARPSSAQALG
LDGAIAHFDHLIEQAASSIPACSCRDMLRQLVQLEAERLVPKALCDGYFKTHPAVAPARI
GAAH
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgttgacacgcgccgaacacgctttgagctcccattttgagcaagccgccggt
gtgggcgcgccctcgcggctggtggcggccatgcggcatgcggtgttttcaggcggcgca
cgcatccgcccgcaactgtgcatggcggtggccaccgcctgcggtgacgatgcgcccgag
ctgaccaatgcggctgctgtggctttggagttgatgcattgcgcctccttggtgcacgac
gacatgcctgcctttgacaacgccgatacccggcgcggccgccccacggtgcacaaggcc
ttcagcgaaccgctggcgctgctggcgggggatggcctgatcgtcatggcctaccgcgtt
ttgttgcaagcgggcgcgcagcggcctgatcgcctgatcgcgctgatggacaacatgacc
accggcgtgggcctgcccaacggcatcgtggccgggcaagcctgggagtgcgagaccagt
gccgatctgggccaataccaacgcgccaaaacaggcgctttgttcgtttcggccacttgc
gcaggcgcgctcagctgcggctacgagcccgagccatgggccccattgggggcttatttg
ggcgaggcctaccaagtggcggatgacatccgcgacgtgatcgccgacgccgccaccttg
ggtaaacctgcagggcaggacgcattacacgcccgccccagctcggcccaggcgctgggc
ctcgatggggccattgcccactttgaccacctgatcgagcaggctgcctcgtcgatcccg
gcttgctcgtgccgcgacatgttgcgccagctggtgcagctcgaagccgaacgcttggtg
cccaaggccctgtgcgacggctatttcaagacgcacccggccgtcgccccggcccgcatc
ggtgccgcgcactga
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