Limnohabitans sp. 63ED37-2: L63ED372_00695
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Entry
L63ED372_00695 CDS
T04121
Symbol
serS
Name
(GenBank) Serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
lih
Limnohabitans sp. 63ED37-2
Pathway
lih00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lih00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
L63ED372_00695 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lih01007
]
L63ED372_00695 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lih03016
]
L63ED372_00695 (serS)
Enzymes [BR:
lih01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
L63ED372_00695 (serS)
Amino acid related enzymes [BR:
lih01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
L63ED372_00695 (serS)
Transfer RNA biogenesis [BR:
lih03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
L63ED372_00695 (serS)
Prokaryotic type
L63ED372_00695 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
CENP-H
Uso1_p115_C
TMF_TATA_bd
TetR_C_38
DUF1664
DUF4140
Motif
Other DBs
NCBI-ProteinID:
ALK87922
UniProt:
A0A0P0M7Q5
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All DBs
Position
728701..730008
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AA seq
435 aa
AA seq
DB search
MLDIVLLRKDLDAVVARLQTRKTPQLFLNVDAFRALEGERKTLQTRTEELQSQRNSLSKQ
IGMLKGKGQHAEADAVMAQVGAIKDELDASAQRLEVIQAELQNLLLAVPNLPHESVPVGG
GEEGNIEVRRWGTVPTFDFELKDHVDIGAPLGLDFETGTKLTGSRFTFMRGPVARLHRAL
AQFMLDVQTSEHGYTECYTPYIVNADTLRGTGQLPKFEADLFAANKGGQEGEESQALYLI
PTSEVTLTNVVRDEVLAESDLPIKLTAHTPCFRSEAGSGGRDVRGLIRQHQFDKVEMVQI
VHPDQSYEALEAMTGHAEAILQKLGLPYRVMSLCTGDMGFGASKTYDLEVWVPAQNTYRE
ISSVSNCEAFQARRLQARFKNAQGKNELVHTLNGSGLAVGRALVAVLENYQNADGSVTVP
EVLRPYLGGLETLRA
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgcttgatattgttcttctccgcaaagatctggacgccgttgtcgcgcgtttgcagacc
cgtaaaaccccccaacttttcctgaatgtggacgctttccgcgctttggaaggcgagcgc
aaaacgctgcaaacccgtaccgaagagctgcaaagccagcgtaatagcctgtccaaacaa
attggcatgctcaaaggcaaaggccagcatgccgaggccgatgcggtcatggcccaagtg
ggtgccatcaaggacgagctggacgcttcggcccagcgcctggaggtgatccaggccgag
ctgcaaaacttgctcttggctgtgcccaatttgccgcacgaatcggttcctgtgggcggg
ggcgaagagggcaacatcgaggtgcgccgctggggcacggtgcccacttttgacttcgag
ctcaaggaccatgtggacatcggcgctccactgggcctggactttgagaccggcaccaag
ctgaccggctcgcgcttcactttcatgcgcggcccggtggcccgtttgcaccgtgcgctg
gcgcagttcatgctcgatgtgcagaccagcgagcacggctacaccgagtgctacacgcct
tacatcgtgaacgccgacacgctgcgtggcacgggccagctgcccaagttcgaggccgat
ttgtttgccgccaacaagggtggtcaagagggcgaggaaagccaggcgttgtacctcatt
ccgacatcagaggtgacgctgaccaacgtggtgcgcgacgaggtgttggccgagagcgat
ttgccgatcaaactgaccgcacacaccccgtgcttccgctcggaggcgggcagtggtggc
cgcgatgtgcgtggtctgattcgtcagcaccagtttgacaaagtcgagatggtgcagatc
gtgcatcccgatcaaagctacgaagcgctggaagccatgaccggccacgctgaggccatt
ttgcaaaagctgggcttgccctaccgcgtgatgagtttgtgcacgggcgacatgggcttt
ggcgccagcaagacctatgacctggaggtctgggtgcccgcacaaaacacttaccgcgag
atcagctcggtgtccaattgcgaggccttccaggctcgccgtctgcaagcgcgtttcaaa
aacgcccaaggcaagaacgagctggtgcacaccttgaacggctcgggcctggccgtgggc
cgtgcgctggtggcggttttggagaattaccagaacgcggatggctcggtcaccgtgccc
gaggtgctgcgtccctatttgggtgggttggagacccttcgggcctga
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