KEGG   Limnohabitans sp. 63ED37-2: L63ED372_00713
Entry
L63ED372_00713    CDS       T04121                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
lih  Limnohabitans sp. 63ED37-2
Pathway
lih03030  DNA replication
lih03410  Base excision repair
lih03420  Nucleotide excision repair
lih03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lih00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    L63ED372_00713 (polA)
   03410 Base excision repair
    L63ED372_00713 (polA)
   03420 Nucleotide excision repair
    L63ED372_00713 (polA)
   03440 Homologous recombination
    L63ED372_00713 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lih03032]
    L63ED372_00713 (polA)
   03400 DNA repair and recombination proteins [BR:lih03400]
    L63ED372_00713 (polA)
Enzymes [BR:lih01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     L63ED372_00713 (polA)
DNA replication proteins [BR:lih03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     L63ED372_00713 (polA)
DNA repair and recombination proteins [BR:lih03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     L63ED372_00713 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     L63ED372_00713 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1
Other DBs
NCBI-ProteinID: ALK87939
UniProt: A0A0P0LGC1
LinkDB
Position
745948..748836
AA seq 962 aa
MSEKTPDTAPTTAPTAAPNMAPSTTKPSLLLVDGSSYLYRAFHAMPDLRAVPGDPASPAT
GAIRGMINMMERLRKDVPAMYAACVFDAKGPTFRDELYPEYKANRSPMPDDLRSQIEPIH
ELVRLMGWTVLDVPGVEADDVIATLAHVAAQQGITVTVSSGDKDLSQLVNEHITIIDTMN
GKVRDVAGVTAEFGVPPSLMIDYQTLVGDTVDNVPGVAKVGPKTAAKWLMEYGSLDKLME
NAHDIKGVAGENLRQAVDWLPKGRALVTMKTDCDLNGWVPGLPSLASLHLHAPDKDKLLN
FYQTYGFKGLVQSLGGAVPAPAAKAKAAKPKDTGMGDLFGAGEAEAAAALPELDRAASAV
QGELKYDTVLDWAAFDTWLARIEQAPLTAIDTETTSLDAMRAEIVGISLSVTPGEAAYIP
LAHNGPGAPEQLPLADVLAKLKPWLENPARHKLGQNIKYDRHVFANHGIEVQGYAHDTML
ESYVLEVHKPHGLSSLAERHVGRRGVTYEDLCGKGAHQIPFAQVDVDKAAHYSCEDSDQC
LDVHLALWPQIEAHAGLKYVYELEIATSEALYRIERNGVLIDAPTLAAQSQALGERIVQL
ETEAYEIAGQPFNLSSPKQLGEIFFDKLGLPVIKKTATGARSTDEEVLEKLAEDYPLPAR
ILEHRSLAKLKGTYTDKLAQLALPRTGRVHTHYAQAVAVTGRLSSNEPNLQNIPVRTAEG
RKVREAFVAPVGCVIASADYSQIELRIMAHLSDDAALLKAFHEGLDVHKATAAEVFGATP
YTVSSEQRRYAKTINFGLIYGMSAFGLAKALSIDNTAAKNYITRYFERFAGVKHYMDATR
EQAKALGYVETVFGRRLMLPEINSPNGPRRAGAERAAINAPMQGTAADLIKLSMVAVQKA
LDEQSKATKVIMQVHDELVFEVPESEVEWVRTEVPRIMAGVADLKVPLLAEVGFGPNWEQ
AH
NT seq 2889 nt   +upstreamnt  +downstreamnt
atgagcgaaaaaacccctgacaccgccccaaccacggcccccaccgcggcccccaacatg
gccccatccaccacaaaacccagcttgctgctggtagacggctccagttacctgtaccgc
gcctttcacgccatgcccgatctgcgggctgtgccgggcgacccggcgagccccgccacc
ggggccattcgcggcatgatcaacatgatggagcggctgcgcaaggatgtgccagccatg
tacgccgcctgcgtgttcgacgccaaaggcccgactttccgtgatgagctgtaccccgaa
tacaaagccaaccgcagccccatgcccgacgatttgcgctcgcagatcgagccgatccac
gagttggtgcgcctgatgggctggaccgtgctggacgtgccgggcgtggaggccgatgac
gtgattgccacgttggcccatgtggccgcgcagcagggaatcaccgtgacggtgtcgagc
ggcgacaaggatttgagccagctggtcaacgagcacatcaccatcatcgacaccatgaac
ggcaaggtgcgcgatgtggcgggtgtgaccgccgagtttggtgtgccgccctcgctgatg
attgactaccaaaccctggtgggcgacacggtggacaacgtgccgggcgtggccaaagtc
ggccccaaaacggcggccaagtggctgatggaatacggctcgctcgacaagctcatggaa
aacgcccacgacatcaaaggcgtggcgggcgagaacctgcgccaggcggtggactggctg
cccaagggccgtgccctggtgaccatgaaaaccgattgcgacctgaacggctgggtgccc
ggtttgccgtcgctggccagccttcacctgcacgcgccggacaaagacaagctgctgaat
ttttaccagacctacggcttcaaggggctggtgcagtcgctgggtggggctgtgcctgcg
cctgcggccaaagccaaagcggccaaacccaaagacacgggcatgggggatttgtttggt
gctggtgaggctgaagcggctgcggccttgcccgagttggacagagccgccagcgctgtt
cagggcgagttgaaatacgacaccgtgctggactgggccgcgttcgacacttggttggcc
cgcatcgaacaagccccgctcaccgccatcgacaccgaaaccacttcgctggacgccatg
cgcgccgagattgtcggaatttcgctcagcgtcacgccgggcgaggcggcttacattccg
ctggcccacaacggcccgggtgcacccgagcagctgccgctggccgatgtgctggccaag
ctcaagccttggctggaaaacccggcccgccacaagctgggccagaacatcaaatacgac
cgccatgtgttcgcgaaccacggcatcgaggtgcagggctacgcgcacgacaccatgctg
gaaagctatgtgctcgaagtgcacaagccgcatggcctttctagcctggccgagcggcat
gtgggccgccggggcgtgacctacgaagacctgtgcggcaagggtgcgcaccagatcccg
tttgcgcaggtcgatgtggacaaggccgcgcattattcctgcgaagactcggaccagtgc
ctggacgtgcatttggcgctgtggccgcagatcgaggcgcatgcgggcctcaagtacgtg
tacgagctggaaatcgccaccagcgaagcgctttaccgcatcgaacgcaacggcgtgctg
atcgacgcgcccacgctggccgcgcaaagccaggcgctgggcgagcgcattgtccagctc
gaaaccgaggcctatgagatcgcggggcagcccttcaacctgtccagccccaagcaactg
ggcgaaattttctttgacaagctgggtctgcccgtcatcaagaaaaccgccaccggggcc
cgcagcaccgacgaagaggtgctggaaaaactggccgaagactacccgctgcccgcccgc
atcttggagcaccgcagcctggccaaactcaaaggcacttacaccgacaagctggcgcag
ctggccttgccgcgcacggggcgtgtgcacacccactatgcgcaggcggtggccgtcaca
ggccgcttgtcgagcaacgagcccaacctgcaaaacatcccagtgcgcaccgccgaaggc
cgcaaggtgcgcgaggcctttgtggccccggtaggctgcgtgattgccagcgccgactac
agccagatcgagctgcgcatcatggcgcacctgagtgacgacgcggccttactcaaggcc
ttccatgaagggctggacgtgcacaaggccacggcggctgaggtgtttggcgccacgccc
tacaccgtgagcagcgagcagcgccgctacgccaagaccatcaacttcggtttgatttac
ggcatgagcgcgtttgggctggccaaggcgctctccatcgacaacaccgccgccaaaaac
tacattacccgctactttgagcgttttgcgggcgtcaaacactacatggacgccacccgc
gagcaggccaaggcgctgggttatgtggagaccgtgtttggtcgccgcctgatgctgccc
gagatcaacagccccaacggcccacgccgcgccggggccgagcgcgccgccatcaacgcg
cccatgcagggcacagcggcagacctgatcaagctgagcatggtcgccgtgcaaaaggcg
ctcgacgaacaaagcaaggccaccaaggtcatcatgcaggtgcacgacgaattggtgttt
gaagtgcccgaatcagaagtcgagtgggtgcgcaccgaggtgccgcgcatcatggcgggg
gtggccgatttgaaggtgcccctgctggccgaagtgggctttgggccgaactgggagcag
gcgcactga

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