Limnohabitans sp. 63ED37-2: L63ED372_00713
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Entry
L63ED372_00713 CDS
T04121
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lih
Limnohabitans sp. 63ED37-2
Pathway
lih03030
DNA replication
lih03410
Base excision repair
lih03420
Nucleotide excision repair
lih03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L63ED372_00713 (polA)
03410 Base excision repair
L63ED372_00713 (polA)
03420 Nucleotide excision repair
L63ED372_00713 (polA)
03440 Homologous recombination
L63ED372_00713 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lih03032
]
L63ED372_00713 (polA)
03400 DNA repair and recombination proteins [BR:
lih03400
]
L63ED372_00713 (polA)
Enzymes [BR:
lih01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L63ED372_00713 (polA)
DNA replication proteins [BR:
lih03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
L63ED372_00713 (polA)
DNA repair and recombination proteins [BR:
lih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
L63ED372_00713 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L63ED372_00713 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
ALK87939
UniProt:
A0A0P0LGC1
LinkDB
All DBs
Position
745948..748836
Genome browser
AA seq
962 aa
AA seq
DB search
MSEKTPDTAPTTAPTAAPNMAPSTTKPSLLLVDGSSYLYRAFHAMPDLRAVPGDPASPAT
GAIRGMINMMERLRKDVPAMYAACVFDAKGPTFRDELYPEYKANRSPMPDDLRSQIEPIH
ELVRLMGWTVLDVPGVEADDVIATLAHVAAQQGITVTVSSGDKDLSQLVNEHITIIDTMN
GKVRDVAGVTAEFGVPPSLMIDYQTLVGDTVDNVPGVAKVGPKTAAKWLMEYGSLDKLME
NAHDIKGVAGENLRQAVDWLPKGRALVTMKTDCDLNGWVPGLPSLASLHLHAPDKDKLLN
FYQTYGFKGLVQSLGGAVPAPAAKAKAAKPKDTGMGDLFGAGEAEAAAALPELDRAASAV
QGELKYDTVLDWAAFDTWLARIEQAPLTAIDTETTSLDAMRAEIVGISLSVTPGEAAYIP
LAHNGPGAPEQLPLADVLAKLKPWLENPARHKLGQNIKYDRHVFANHGIEVQGYAHDTML
ESYVLEVHKPHGLSSLAERHVGRRGVTYEDLCGKGAHQIPFAQVDVDKAAHYSCEDSDQC
LDVHLALWPQIEAHAGLKYVYELEIATSEALYRIERNGVLIDAPTLAAQSQALGERIVQL
ETEAYEIAGQPFNLSSPKQLGEIFFDKLGLPVIKKTATGARSTDEEVLEKLAEDYPLPAR
ILEHRSLAKLKGTYTDKLAQLALPRTGRVHTHYAQAVAVTGRLSSNEPNLQNIPVRTAEG
RKVREAFVAPVGCVIASADYSQIELRIMAHLSDDAALLKAFHEGLDVHKATAAEVFGATP
YTVSSEQRRYAKTINFGLIYGMSAFGLAKALSIDNTAAKNYITRYFERFAGVKHYMDATR
EQAKALGYVETVFGRRLMLPEINSPNGPRRAGAERAAINAPMQGTAADLIKLSMVAVQKA
LDEQSKATKVIMQVHDELVFEVPESEVEWVRTEVPRIMAGVADLKVPLLAEVGFGPNWEQ
AH
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaaaacccctgacaccgccccaaccacggcccccaccgcggcccccaacatg
gccccatccaccacaaaacccagcttgctgctggtagacggctccagttacctgtaccgc
gcctttcacgccatgcccgatctgcgggctgtgccgggcgacccggcgagccccgccacc
ggggccattcgcggcatgatcaacatgatggagcggctgcgcaaggatgtgccagccatg
tacgccgcctgcgtgttcgacgccaaaggcccgactttccgtgatgagctgtaccccgaa
tacaaagccaaccgcagccccatgcccgacgatttgcgctcgcagatcgagccgatccac
gagttggtgcgcctgatgggctggaccgtgctggacgtgccgggcgtggaggccgatgac
gtgattgccacgttggcccatgtggccgcgcagcagggaatcaccgtgacggtgtcgagc
ggcgacaaggatttgagccagctggtcaacgagcacatcaccatcatcgacaccatgaac
ggcaaggtgcgcgatgtggcgggtgtgaccgccgagtttggtgtgccgccctcgctgatg
attgactaccaaaccctggtgggcgacacggtggacaacgtgccgggcgtggccaaagtc
ggccccaaaacggcggccaagtggctgatggaatacggctcgctcgacaagctcatggaa
aacgcccacgacatcaaaggcgtggcgggcgagaacctgcgccaggcggtggactggctg
cccaagggccgtgccctggtgaccatgaaaaccgattgcgacctgaacggctgggtgccc
ggtttgccgtcgctggccagccttcacctgcacgcgccggacaaagacaagctgctgaat
ttttaccagacctacggcttcaaggggctggtgcagtcgctgggtggggctgtgcctgcg
cctgcggccaaagccaaagcggccaaacccaaagacacgggcatgggggatttgtttggt
gctggtgaggctgaagcggctgcggccttgcccgagttggacagagccgccagcgctgtt
cagggcgagttgaaatacgacaccgtgctggactgggccgcgttcgacacttggttggcc
cgcatcgaacaagccccgctcaccgccatcgacaccgaaaccacttcgctggacgccatg
cgcgccgagattgtcggaatttcgctcagcgtcacgccgggcgaggcggcttacattccg
ctggcccacaacggcccgggtgcacccgagcagctgccgctggccgatgtgctggccaag
ctcaagccttggctggaaaacccggcccgccacaagctgggccagaacatcaaatacgac
cgccatgtgttcgcgaaccacggcatcgaggtgcagggctacgcgcacgacaccatgctg
gaaagctatgtgctcgaagtgcacaagccgcatggcctttctagcctggccgagcggcat
gtgggccgccggggcgtgacctacgaagacctgtgcggcaagggtgcgcaccagatcccg
tttgcgcaggtcgatgtggacaaggccgcgcattattcctgcgaagactcggaccagtgc
ctggacgtgcatttggcgctgtggccgcagatcgaggcgcatgcgggcctcaagtacgtg
tacgagctggaaatcgccaccagcgaagcgctttaccgcatcgaacgcaacggcgtgctg
atcgacgcgcccacgctggccgcgcaaagccaggcgctgggcgagcgcattgtccagctc
gaaaccgaggcctatgagatcgcggggcagcccttcaacctgtccagccccaagcaactg
ggcgaaattttctttgacaagctgggtctgcccgtcatcaagaaaaccgccaccggggcc
cgcagcaccgacgaagaggtgctggaaaaactggccgaagactacccgctgcccgcccgc
atcttggagcaccgcagcctggccaaactcaaaggcacttacaccgacaagctggcgcag
ctggccttgccgcgcacggggcgtgtgcacacccactatgcgcaggcggtggccgtcaca
ggccgcttgtcgagcaacgagcccaacctgcaaaacatcccagtgcgcaccgccgaaggc
cgcaaggtgcgcgaggcctttgtggccccggtaggctgcgtgattgccagcgccgactac
agccagatcgagctgcgcatcatggcgcacctgagtgacgacgcggccttactcaaggcc
ttccatgaagggctggacgtgcacaaggccacggcggctgaggtgtttggcgccacgccc
tacaccgtgagcagcgagcagcgccgctacgccaagaccatcaacttcggtttgatttac
ggcatgagcgcgtttgggctggccaaggcgctctccatcgacaacaccgccgccaaaaac
tacattacccgctactttgagcgttttgcgggcgtcaaacactacatggacgccacccgc
gagcaggccaaggcgctgggttatgtggagaccgtgtttggtcgccgcctgatgctgccc
gagatcaacagccccaacggcccacgccgcgccggggccgagcgcgccgccatcaacgcg
cccatgcagggcacagcggcagacctgatcaagctgagcatggtcgccgtgcaaaaggcg
ctcgacgaacaaagcaaggccaccaaggtcatcatgcaggtgcacgacgaattggtgttt
gaagtgcccgaatcagaagtcgagtgggtgcgcaccgaggtgccgcgcatcatggcgggg
gtggccgatttgaaggtgcccctgctggccgaagtgggctttgggccgaactgggagcag
gcgcactga
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