Limnohabitans sp. 63ED37-2: L63ED372_00780
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Entry
L63ED372_00780 CDS
T04121
Symbol
ydfH_3
Name
(GenBank) putative HTH-type transcriptional regulator YdfH
KO
K11475
GntR family transcriptional regulator, vanillate catabolism transcriptional regulator
Organism
lih
Limnohabitans sp. 63ED37-2
Brite
KEGG Orthology (KO) [BR:
lih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lih03000
]
L63ED372_00780 (ydfH_3)
Transcription factors [BR:
lih03000
]
Prokaryotic type
Helix-turn-helix
GntR family
L63ED372_00780 (ydfH_3)
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Paralog
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GFIT
Motif
Pfam:
FCD
GntR
PaaX
HTH_24
HTH_29
Motif
Other DBs
NCBI-ProteinID:
ALK88002
UniProt:
A0A0P0M8A6
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Position
810232..811017
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AA seq
261 aa
AA seq
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MSINPLRAPHADSPDSADAEFDGSSQAVKAQQRLRELILAGQLPGGTRIAELALVERLGM
SRTPIRAALMRLGEEGLLQTLPGGGYAVRTFSEREVADAIELRGTLEGLAARWAAERGVN
AALMQEADACLDQIDALLQPGTLDDDHFSGYVRLNARFHRLLVEMAGSALLSREIERASG
LPFASPSGFVGVQAHSSDARDTLVVAQYQHRQVLQAIAQREAGRAEALMREHSRIARHHL
GLALQNPQPSVTPGVQLIRPS
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcaacccattacgtgccccgcacgccgacagccctgacagcgccgacgctgag
ttcgatggcagctcgcaagcggtcaaggcgcagcagcgcttgcgggagctgatcctggca
ggtcagctgccggggggcacacgcattgccgagctggcgctggtggagcgcctgggcatg
tcgcgtacccccattcgcgcggccctgatgcgtctgggcgaagaaggtctgctgcaaacg
ctgcccggtggcggttatgcggtgcgcactttttccgagcgcgaagtggcggatgccatt
gaactgcgtggcaccctcgagggcttggctgcgcgttgggctgccgagcgcggcgtgaac
gcagccctcatgcaagaagccgatgcctgcctggaccagatcgacgctttgctgcaaccc
ggcaccttggacgatgaccatttttcgggttatgtgcgtctgaatgcccggtttcaccgg
ctgctggtcgagatggccggtagcgctttattgagccgcgaaatcgaacgtgcatcggga
ctgccttttgcctcgccttcgggttttgtgggtgtgcaggcgcactcctccgacgcccgc
gacaccttggtggtagcccagtaccaacaccgacaagtgctgcaggccatcgcgcagcgc
gaagcgggccgcgccgaagccctgatgcgcgagcactcgcgcattgcacggcatcacctg
ggcctggcgctgcaaaatccgcagccttcggtcacgcccggggtgcaattgatccgacca
tcctga
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