Limnohabitans sp. 63ED37-2: L63ED372_00824
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Entry
L63ED372_00824 CDS
T04121
Symbol
rnc
Name
(GenBank) Ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
lih
Limnohabitans sp. 63ED37-2
Brite
KEGG Orthology (KO) [BR:
lih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lih03019
]
L63ED372_00824 (rnc)
03009 Ribosome biogenesis [BR:
lih03009
]
L63ED372_00824 (rnc)
03036 Chromosome and associated proteins [BR:
lih03036
]
L63ED372_00824 (rnc)
Enzymes [BR:
lih01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
L63ED372_00824 (rnc)
Messenger RNA biogenesis [BR:
lih03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
L63ED372_00824 (rnc)
Ribosome biogenesis [BR:
lih03009
]
Eukaryotic type
90S particles
RNase
L63ED372_00824 (rnc)
Prokaryotic type
rRNA processing factors
L63ED372_00824 (rnc)
Chromosome and associated proteins [BR:
lih03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
L63ED372_00824 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
ALK88046
UniProt:
A0A0P0LP90
LinkDB
All DBs
Position
857887..858579
Genome browser
AA seq
230 aa
AA seq
DB search
MATSPVLSELQVRLGYAFRQQALLQQAVTHRSFSADHNERLEFLGDSVLNLSVAHLLYTQ
LANLPEGDLSRVRANLVKQDTLHQLAKTLDLPAVMRLGEGEMRSGGQNRPSILADALEAI
IGAVYLDGGYKDAQALVERLFAQVDIKPDMQAVGKDPKTELQEWLQGRKLALPKYTVVGT
SGAAHRQQFEVSCEVTELRQTQQGSGASRRAAEQAAAAAMLLTLKSESAA
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
gtggcgacttcccccgttctgtccgaattgcaagtccggctgggttacgccttccgtcag
caagctttgctgcagcaagcggtcacgcaccgcagcttcagtgccgaccacaacgagcgc
ctggaatttttgggtgactcagtgctcaacctgtcggtggcccacctgctgtacacgcaa
ctggccaatttgcccgagggcgatttgtcgcgggtgcgggccaacctggtcaagcaagac
acgctgcaccaactggccaaaaccttggacttgcctgccgtgatgcgattgggcgagggg
gagatgcgctcgggcggtcaaaaccgtccgtccattctggccgatgccctggaagccatc
attggcgcggtttacctggacggcggctacaaggatgcacaagccttggtcgagcgactg
tttgcccaggtcgacatcaaacccgacatgcaggctgtgggcaaagaccccaagaccgaa
ttgcaagagtggctgcaagggcgcaagctcgcgctgcccaaatacaccgtggtcggcacc
tccggggcggcgcaccgccagcagttcgaggtctcttgcgaagtgactgaattgcgccaa
acccaacaaggctcgggcgcatcgcgtcgcgctgccgaacaagcagcggcagccgccatg
ctgctcaccttgaaatccgaaagcgccgcatga
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