Limnohabitans sp. 63ED37-2: L63ED372_00848
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Entry
L63ED372_00848 CDS
T04121
Symbol
ihfB
Name
(GenBank) Integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
lih
Limnohabitans sp. 63ED37-2
Brite
KEGG Orthology (KO) [BR:
lih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lih03032
]
L63ED372_00848 (ihfB)
03036 Chromosome and associated proteins [BR:
lih03036
]
L63ED372_00848 (ihfB)
03400 DNA repair and recombination proteins [BR:
lih03400
]
L63ED372_00848 (ihfB)
DNA replication proteins [BR:
lih03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
L63ED372_00848 (ihfB)
Chromosome and associated proteins [BR:
lih03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
L63ED372_00848 (ihfB)
DNA repair and recombination proteins [BR:
lih03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
L63ED372_00848 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
ALK88070
LinkDB
All DBs
Position
complement(881566..881886)
Genome browser
AA seq
106 aa
AA seq
DB search
MTRSDLVEELAARFAQLTHRDAELAVKTVLDAMSDALVKGHRIEIRGFGSFSINRRPPRV
GRNPRSGESVQIPEKRVPHFKPGKALREAVDAGTPAPPQSAENARQ
NT seq
321 nt
NT seq
+upstream
nt +downstream
nt
atgacccgctccgatctggttgaagaactcgccgcccgctttgcgcaattgacccaccgc
gacgccgaactggccgtcaagacggtgctcgatgcgatgagtgacgcgctggtcaaaggc
caccgcatcgaaattcgcggctttggcagcttctcgatcaaccgtcgtccaccccgtgtt
ggccgcaacccccgatctggcgaaagcgttcagattccagaaaagcgcgtgccccatttc
aagcctggcaaagccctgcgcgaagccgtggatgcgggcacccctgcgccaccgcaaagc
gctgaaaacgctcgacaatga
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integrated database retrieval system
