Limnohabitans sp. 63ED37-2: L63ED372_00942
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Entry
L63ED372_00942 CDS
T04121
Symbol
gntR
Name
(GenBank) HTH-type transcriptional regulator GntR
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
lih
Limnohabitans sp. 63ED37-2
Brite
KEGG Orthology (KO) [BR:
lih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lih03000
]
L63ED372_00942 (gntR)
Transcription factors [BR:
lih03000
]
Prokaryotic type
Helix-turn-helix
LacI family
L63ED372_00942 (gntR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_31
HTH_3
HTH_IclR
HTH_Tnp_ISL3
Xre-like-HTH
HTH_38
HTH_23
HTH_28
HTH_26
HTH_AraC
HTH_Crp_2
HTH_24
HTH_1
NFLD
HTH_AsnC-type
Sigma54_DBD
Motif
Other DBs
NCBI-ProteinID:
ALK88163
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All DBs
Position
978655..979647
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AA seq
330 aa
AA seq
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MTLTDVARAAGVSPSTVSRALRGERAVDPALIERVTAVSDMLGYVPDPAARALASQRSDH
VGILIPLLSNALFVDLLDAAQTRFRAAGYQTLMGVTHYNPSEEEQLLREQLLHRPAGLLV
TGLDHNPATRQLMARSQVPCVHLMDLPASDGEAVYCVGFRQTDAGVAMTRHLLAKGRRRI
AFAAAQLDPRVMQRLYGWRHALQEAGVFDPTLEFLNPAPSSLALGGLMFEQIMQQRPAVD
AIFFCNDDLAQGALMAALRMGVSVPDQVAIAGFNDLTGSDQMLPPLTTVRTPRARIGEAA
ADMLLSLMRGEEPEQPQLDLGFEIVQRQSS
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
gtgaccctgaccgatgtggcccgcgccgcgggcgtgagccccagcaccgtctcccgggcg
ctgcgcggagaacgcgcggtggacccggccttgatcgagcgcgttacagctgtgtcggac
atgctcggatacgtgcccgacccggcggccagggccttggcctcgcagcgcagtgaccac
gtgggcatcttgatcccgctgctgtccaatgccctgttcgtggacctgcttgacgctgcg
cagacccgttttcgcgcggcgggctaccagaccctcatgggcgtgacgcactacaacccc
agcgaagaagagcaactgctgcgcgagcaattgctgcaccgcccggcgggcttgctggtg
accgggctggaccacaacccggccactcgccagctgatggcccgcagccaggtgccctgc
gtgcacctgatggatttgccggccagcgacggagaagccgtgtattgcgtgggctttcgg
caaaccgatgcaggcgttgccatgacgcgccacctgctcgccaagggccgccgccgcatc
gcctttgccgcggcgcaactcgatccgcgcgtgatgcagcgtctgtatggctggcgtcac
gctttgcaagaggcgggtgtattcgaccctaccctcgaattcctcaaccccgcgccttca
tcgctggctttgggtggcttgatgttcgagcaaatcatgcagcagcgcccggccgtggat
gccatctttttttgtaacgacgacttggcccaaggggctttgatggcggcgctgcgcatg
ggtgtgtcggtgccagatcaggtcgcgattgccggcttcaacgacctgacgggcagtgac
caaatgctgcccccgctgaccaccgttcgcacgccgcgagcacgcattggcgaggcggcg
gccgacatgctgctcagtctgatgcgtggtgaggaacccgagcagccccaactggatctg
ggctttgagatcgtgcaacgccaaagcagctga
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