Limnohabitans sp. 63ED37-2: L63ED372_00947
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Entry
L63ED372_00947 CDS
T04121
Symbol
polC_2
Name
(GenBank) DNA polymerase III PolC-type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
lih
Limnohabitans sp. 63ED37-2
Pathway
lih03030
DNA replication
lih03430
Mismatch repair
lih03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L63ED372_00947 (polC_2)
03430 Mismatch repair
L63ED372_00947 (polC_2)
03440 Homologous recombination
L63ED372_00947 (polC_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lih03032
]
L63ED372_00947 (polC_2)
03400 DNA repair and recombination proteins [BR:
lih03400
]
L63ED372_00947 (polC_2)
Enzymes [BR:
lih01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L63ED372_00947 (polC_2)
DNA replication proteins [BR:
lih03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
L63ED372_00947 (polC_2)
DNA repair and recombination proteins [BR:
lih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
L63ED372_00947 (polC_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DUF5710
Motif
Other DBs
NCBI-ProteinID:
ALK88168
LinkDB
All DBs
Position
984484..985587
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AA seq
367 aa
AA seq
DB search
MNKIDQMSFFGFEAESAEKPAQPAKASKSVSPPASVVTPAEALAVAPDSLVAVALPAAPV
AAPLVAQASDPEAMAQALAQHPDFRVLRRLVPRTDYGPVNGQATQRVIVLDTETTGLDSK
SEKVIELAMLSVLVDSATGLPVGPVTVYESFEDPGRPIPPQITEITGIDDSMVQGQRIDD
AAVNALVQAADLVVAHNAGFDRPFVEARFPVFAAKAWGCSFQGIDWKKEGSGSAKLEFLA
SERGWFYDAHRAQVDCHALLQVLSSPLADGQTGLSRLLAGAGQSRYKLRATGAPFESKDK
LKARGYRWDGEGRVWWCSLASDALLDAECDWLRAEVYGQRSARVQLEAMDSRVQFSSRSG
PVSERSV
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaattgaccagatgagttttttcggctttgaggccgaatctgccgaaaaacct
gcccagcccgctaaggcttcaaagtctgtcagccctccggcctcggtggtgacacctgcc
gaagcccttgcggtggcgcccgactcccttgttgccgtggctctcccagcggcgcccgta
gctgcacccttggtggcgcaggccagcgaccccgaagccatggcccaggccttggcgcag
caccccgactttcgtgttttgcggcgtctggtgccgcgcaccgactatgggccggtgaac
gggcaagccacccagcgcgtgatcgtgctggacaccgaaaccaccgggctggatagcaag
agcgaaaaagtcattgagctggccatgttgtcggtgctggtggacagcgcgaccggcttg
cctgtgggcccggtcacggtttacgagtcgttcgaagacccaggccggccgattccgccc
cagatcaccgagatcaccggcattgacgacagcatggtgcagggccaacgcatcgacgac
gcggccgtgaacgccttggtgcaagcggccgatttggttgtggcgcacaacgctgggttt
gaccggccctttgtcgaggcgcgtttcccggtgtttgccgccaaagcctggggctgttct
tttcaggggattgactggaaaaaagagggcagcggctcggccaagctggagtttttggcg
tcagagcgcggctggttctacgacgcgcaccgggcgcaagtggattgccatgctttgctg
caggtgttgtcctcgcccttggccgatggccaaacgggcctgtcccgcttgttggccggg
gcagggcagagccgctacaagctgcgggccacgggggcgccgttcgagtccaaagacaag
ctcaaagcccggggctaccgttgggacggcgaaggccgggtctggtggtgcagcttggcc
tcggacgctttgctggacgccgagtgcgactggttgcgtgcagaagtctatggccagcgc
agtgcccgggtgcaactggaggcgatggacagccgggtgcagttttccagccgttcggga
ccggtgagcgagcgttcggtttga
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