Limnohabitans sp. 63ED37-2: L63ED372_01027
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Entry
L63ED372_01027 CDS
T04121
Symbol
crtB_3
Name
(GenBank) All-trans-phytoene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
lih
Limnohabitans sp. 63ED37-2
Pathway
lih00100
Steroid biosynthesis
lih00909
Sesquiterpenoid and triterpenoid biosynthesis
lih01100
Metabolic pathways
lih01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
lih00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
L63ED372_01027 (crtB_3)
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
L63ED372_01027 (crtB_3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
lih01006
]
L63ED372_01027 (crtB_3)
Enzymes [BR:
lih01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
L63ED372_01027 (crtB_3)
Prenyltransferases [BR:
lih01006
]
Terpene biosynthesis
Squalene/phytoene synthase
L63ED372_01027 (crtB_3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
ALK88246
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All DBs
Position
complement(1063763..1064839)
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AA seq
358 aa
AA seq
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MIKPPPFQPARTRPGLSAAQRQLLRHVSRSFDLSIRLLPQALQAPVAIGYLLARATDTVA
DTTALPLDERQVLLDLMSEAIAAPSTSVPKSHELSRLTQAFAAQQTDPHERALMQALPQC
LPLLFSLSQADQASVRQVLGHITQGQQLDMTRFGPGLHALQTEAELAEYTWLVAGCVGEF
WTELCGRHLPGYSLLPQEEMMRIGRSYGMGLQRLNIIRDAGADLAAGRCYWPVEILAQAG
LTPALLAQATKTPHTDTLHALAPLYTQWLENTQAQLADGMRYALALKPLRLRLASALPAL
IGARTVALLRQAGPAALNQRVKMPRHEVHALLWRIALGLGSADVLQKEYRKLSGKPLP
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagccccccccatttcagccagcccgaacgcgcccgggcctgagtgcggcccag
cgccagctgctgcgccatgtgtcgcgctcgttcgacctgtccatccgcctcttgccccaa
gcactgcaagccccggtggccatcggctacctgctggcccgtgccaccgacaccgtggcc
gacacgaccgccctgcccttggatgagcgtcaggtgttgctggacctcatgtctgaggcc
atcgccgcaccgagcacctcggtcccaaaaagtcacgagctcagccgcctgacccaagcc
tttgccgcgcaacaaaccgatccgcacgaacgcgccctgatgcaggccctgccccaatgt
ctgccgcttttgttcagcctgtctcaagccgaccaggccagcgtgcgccaggtgctgggc
cacatcacacaaggccaacagctggacatgacccgctttggccccggcctgcacgctttg
caaaccgaagccgagctggccgagtacacctggctggtggccggttgtgtgggcgaattc
tggaccgagttgtgcggccgccacttgcccggctacagcctgctacctcaagaagaaatg
atgcgcattggccgttcctacggaatgggcttgcaacgcctgaacatcatccgcgacgcc
ggggccgacctggctgccggtcgttgttactggcctgtggaaatcttggcgcaggcgggc
ctgaccccggccctgctggcgcaagcgaccaaaaccccacatactgacaccctgcatgca
ctggccccgctttacacccagtggttagagaacacccaagcacaactggccgatggcatg
cgctacgccttggcactcaagcccctgcgcctgcgcctggccagcgccttgccggcattg
atcggtgcacgcaccgtggcgctgctgcgccaagccgggcccgcagccttaaaccagcgc
gtcaaaatgccgcgccacgaagtgcatgccctgctctggcgcatcgccttgggcctcggg
tctgctgacgttttgcaaaaagaatatcgcaaattgtccggcaaacccctgccctga
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