Limnohabitans sp. 63ED37-2: L63ED372_01250
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Entry
L63ED372_01250 CDS
T04121
Symbol
rluB_1
Name
(GenBank) Ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
lih
Limnohabitans sp. 63ED37-2
Brite
KEGG Orthology (KO) [BR:
lih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lih03009
]
L63ED372_01250 (rluB_1)
Enzymes [BR:
lih01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
L63ED372_01250 (rluB_1)
Ribosome biogenesis [BR:
lih03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
L63ED372_01250 (rluB_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ALK88461
UniProt:
A0A0P0M8K1
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All DBs
Position
1295256..1296470
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AA seq
404 aa
AA seq
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MNDSSSNAQGQRPGVYAARKSGAATVIQTTATPYKAIDLADVVSGQFDDEEAAEAVAQDL
GKRVLAPQTDSPKLHKVLAQAGMGSRLEMEKLITEGRIAVNNEPAHVGQRVQYGDQIKVD
GKPIRIRIDPPPARVIAYHKPAGEIVSHDDPQNRPSVFRKLPRLQNGKWQSVGRLDLNTE
GLLLFTSSGELANQLMHPRFGLEREYAVRVLGALSKDEKQKLLDGVMLDDGPAQFGSIED
GGGEGSNCWYRVTISEGRNREVRRMMEAVGHAVSRLIRIRYGAMVLPHGLRRGAWLELDE
SDIRSLMRAAGTSERPRPVTEHPVRTNRNDRRPRTGGQGRVGSAVPRAKPAAKPNQAPGG
SGLHAKSDAPKSEPKYIGAESFNRLKNTPGGPGRGGRGGSGRSR
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgaacgattcctcttccaatgcacagggccagcgccctggcgtgtacgcagctcgcaag
tcgggcgcggccactgtgatccaaacgaccgcgacgccttacaaggcgattgacctggcc
gatgtggtctctggccagttcgacgacgaggaggcggccgaagccgtggcgcaggacttg
ggcaagcgcgtgctcgcgccgcagaccgactcgcccaaattgcacaaggtgctggcccag
gccggtatgggctcgcgcctggagatggaaaaactcatcaccgaaggccgcatcgccgtg
aacaacgagcccgcccatgtgggccagcgcgtgcaatacggtgaccaaatcaaggtcgac
ggtaagccgatccgcatccgcatcgacccgccacccgcccgtgtgatcgcttaccacaag
cccgcaggcgagatcgtcagccacgatgacccgcaaaaccgtccctcggtctttcgcaag
ctgccgcgcctgcaaaacggcaaatggcagtcggtgggccgcctcgacctcaacaccgaa
ggtctgctgcttttcaccagttcgggcgagctggccaaccaactcatgcaccctcgtttt
ggtctggagcgcgagtacgccgtgcgtgtcctgggcgctttgagcaaggatgaaaaacaa
aaactgctggacggcgtgatgctcgacgacggcccggcccagttcggctcgatcgaagac
ggcggtggcgagggctccaactgctggtaccgcgtcaccatctctgaaggccgcaaccgc
gaggtgcgccgcatgatggaagccgtgggccatgcggtcagccgcctgatccgcatccgc
tacggcgccatggtgctgccgcacggcctgcgccgtggtgcctggctggagctggacgag
tccgacatccgctctttgatgcgtgcagcgggcaccagcgagcgcccccgcccggtgacc
gagcacccggtgcgaaccaaccgcaacgaccgccgccctcgcacgggcgggcagggcagg
gtgggcagcgccgtgccccgcgccaaacccgcagccaaacccaaccaggcgcccgggggc
tctggattgcacgccaaatcggatgcgccgaaaagcgagcccaaatacattggcgcagaa
agtttcaaccgcctcaaaaatacgccgggcggtcctggccggggcgggcgtggtggcagt
ggccgaagccgctga
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