Limnohabitans sp. 63ED37-2: L63ED372_01292
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Entry
L63ED372_01292 CDS
T04121
Symbol
rpfC_1
Name
(GenBank) Sensory/regulatory protein RpfC
KO
K20974
two-component system, sensor histidine kinase [EC:
2.7.13.3
]
Organism
lih
Limnohabitans sp. 63ED37-2
Pathway
lih02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
lih00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
L63ED372_01292 (rpfC_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lih01001
]
L63ED372_01292 (rpfC_1)
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
lih02022
]
L63ED372_01292 (rpfC_1)
Enzymes [BR:
lih01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
L63ED372_01292 (rpfC_1)
Protein kinases [BR:
lih01001
]
Histidine kinases
Other
L63ED372_01292 (rpfC_1)
Two-component system [BR:
lih02022
]
Other families
SagS-HptB-HsbR (swarming activity and biofilm formation)
L63ED372_01292 (rpfC_1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HATPase_c
Response_reg
HisKA
DUF4381
Motif
Other DBs
NCBI-ProteinID:
ALK88503
UniProt:
A0A0P0LQB8
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All DBs
Position
complement(1332644..1334440)
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AA seq
598 aa
AA seq
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MLSATTPSIDPTLSTSGFGFLRPWWRQPMDNEREWLFFSFLLILTIGYAAFALVSWGVQF
HDGLLANALGILAMVILGGLRMAGVRLSRLITALQVLTLSQAFAITWLTGGIYSATISWL
ALASLPAVLATKPRARLAGLAAGWLLIVGLYVYALLGGEMALQIMPQDLIHWHLMMAIVI
FGMQLALLFRLNNVRNERLQRTQQQRRQLRQLTKKLQQTQQQKDLFVASVSHELRTPMNA
ILGLADLIQHDKKLDAEVRTKMEDIQKSGEHLLTIINDLLDHAQMESGRLQVVQEPFNLH
DTLNTAFQLLKRRAESKPLRYTLHIDPNVPTWVKGDSHRLTQILVNLLGNAIKFTAQGEV
DLHCSVLAEDGEPQGTVPLRLAVRDTGIGIAPDLQHRVYQSFSQVDDSIARRFGGNGLGL
SITKGLVEAMGGSIGLHSELGVGTTFHVLLPCPLSQAPSHTLPAPEEDSSSDQVIRILIA
DDNPLNRQIVSLQLRRHLPRARITEVEDGLQAYEAVRDGEGFDVILMDLLMPEMDGQTAT
RKIRTELPEPQRSTPIIALTANGDKDELERCLASGMNESMLKPFNRNLLIKRVLSYVA
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgttatctgccaccactccttccattgatcccaccctgagcacctctggtttcggcttc
ttgcgtccctggtggcgacagccgatggacaacgagcgcgagtggctgttcttttcgttc
ctgttgatcctgaccatcggctatgccgcttttgccctggtgtcctggggcgtgcagttc
cacgacggattactggccaacgcactgggcatcttggccatggtgatcttgggggggttg
cgcatggccggggtgcggctcagccgcttgatcaccgctttgcaggttttgacactgtct
caggcctttgccatcacctggctaaccggcgggatctactcggccaccatcagctggctt
gctttggcctctttgcccgcagtgctggcaaccaagccgcgggctcgcttagccggtttg
gctgccggctggctgctcattgtgggcttgtatgtgtacgccctgttgggcggcgaaatg
gcgcttcaaatcatgccgcaggacctgatccattggcacttgatgatggccattgtgatt
tttggcatgcagttggcgttgttgtttcgcttgaacaacgttcgcaacgagcggctgcaa
cgcacccaacaacaacgacgccagttgcgccaactcaccaaaaaactccaacaaacacag
caacaaaaagacctgttcgtggcctctgtcagccacgagttgcgcaccccgatgaacgcc
atcttggggttggccgacctgattcagcatgacaaaaaactggatgctgaggtgcgcacc
aagatggaggacatccagaaatcgggggagcacctgctaaccatcatcaacgacctgctg
gaccatgcccagatggaatccggacggcttcaggtggtgcaagagccttttaacctgcac
gacaccttgaacacggccttccagttgctcaagcgccgcgcagaaagcaaacccctgcgg
tacaccctgcacatcgaccccaacgtgcccacatgggtcaagggcgacagccacaggttg
actcagatcttggtcaatttgctcggcaacgccatcaaattcacggcgcaaggtgaggtc
gatttgcattgcagcgtcctggccgaagacggcgagccccaaggtactgtgcccttgcgg
ctggcggtccgggacaccggcattggcattgcgccggatttgcagcaccgggtctatcaa
agcttttcgcaggtggacgacagcattgcccgtcgttttgggggtaatgggctgggcctg
tcgatcaccaaagggctggtcgaagccatgggcggcagcatcgggctgcacagcgaactg
ggcgtgggcaccaccttccatgtcctgctgccctgcccgctgagccaagccccgtcccac
accctgcctgcacccgaggaagacagcagcagcgaccaagtgatccgcatcctgatcgcc
gatgacaaccccttgaaccgccaaattgtctcccttcagctgcgccgacacttgccgcga
gcgcggatcaccgaagtggaggacggcctccaagcctatgaagccgtgcgcgatggcgag
ggctttgatgtgattttgatggacctgctgatgccggaaatggatggccagaccgcgacc
cgaaaaatccgcaccgagcttcccgagccccaacgctcgaccccgatcattgcgctcacc
gccaacggtgacaaagacgaactggagcggtgcctggcgtctggcatgaacgagagcatg
ctcaaacccttcaaccgcaatttgctcatcaagcgggtgctttcttatgtggcgtga
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