Limnohabitans sp. 63ED37-2: L63ED372_01352
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Entry
L63ED372_01352 CDS
T04121
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lih
Limnohabitans sp. 63ED37-2
Brite
KEGG Orthology (KO) [BR:
lih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lih03016
]
L63ED372_01352 (truB)
Enzymes [BR:
lih01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
L63ED372_01352 (truB)
Transfer RNA biogenesis [BR:
lih03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
L63ED372_01352 (truB)
Prokaryotic type
L63ED372_01352 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ALK88561
UniProt:
A0A0P0LQH6
LinkDB
All DBs
Position
1401937..1402917
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AA seq
326 aa
AA seq
DB search
MNAPRTRVQRRPVHGVLLLDKPLGLSSNQALQKAKWLLRAEKGGHTGTLDPLATGVLPLC
FGAATKFSQQHLDADKTYETTVRLGIKTSTADAEGEVIAVREVSCSAGMVVEVLDRFMGP
ISQVPPMHSALKKDGKALYEYAREGETVEREARNVVIHDLDLLDMQLQGDAPFLRLRVRC
SKGTYIRTLGEDIAEALGCGGHLSALRRVVTGPFEEAQCVTLSALENMDESQRIAAMQPV
DVLLPGYTEVCLDSENAGKFLSGVRRRGPWNDCDQVVVYGEHPRALLGTAHVHGGELIPG
RLLSPIEIQQILEKSPVNAPLLAEQV
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcgccacgcacacgggtgcaacggcgccctgtgcacggggtgctgctgctcgac
aaaccgctgggtctttccagtaaccaggctttgcaaaaagccaaatggttgcttcgcgcg
gaaaaaggcggtcataccggaacgctcgaccctttggccacgggggtgttgcctttgtgt
tttggtgcagccaccaagttcagccagcagcatctggatgccgacaagacttacgagacc
acggttcgtcttggcatcaaaaccagcacggctgacgccgaaggcgaggtgatcgctgtc
cgagaagtgtcatgttcggcaggtatggtggtggaagttcttgaccggttcatggggccc
atcagccaagtgccgccgatgcacagtgccttgaaaaaggacggcaaggccttgtacgaa
tatgcccgcgagggcgaaaccgtggagcgcgaagcgcgaaacgtggtcatacatgatctg
gatctgctggacatgcaactgcaaggtgatgcgccttttttgcgtttgcgtgttcggtgc
agcaaaggcacttacatccgaaccttgggcgaagacatcgccgaagcgttgggttgtggt
ggccatttgagcgctttgcgccgggtggtcaccgggccttttgaggaagcccagtgtgtg
acgctgtctgcactggagaacatggatgaaagccagcggattgcggcgatgcagccggtc
gatgtactgctgccgggctacaccgaagtgtgtctggacagcgagaacgcagggaaattt
ttgagtggggtgcgccgtcgcggcccttggaatgattgtgatcaagtcgtggtgtatgga
gaacatcctcgtgccttgctgggaacagcgcatgtgcacggcggcgaattgattccgggt
cgattgttgagcccgatcgaaattcaacagattttggaaaaatcacctgtcaacgcgcca
ttgctggccgagcaggtttaa
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