Limnohabitans sp. 63ED37-2: L63ED372_01404
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Entry
L63ED372_01404 CDS
T04121
Symbol
rapA_2
Name
(GenBank) RNA polymerase-associated protein RapA
Organism
lih
Limnohabitans sp. 63ED37-2
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SWIM
Motif
Other DBs
NCBI-ProteinID:
ALK88613
UniProt:
A0A0P0LHZ4
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Position
complement(1456284..1459682)
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AA seq
1132 aa
AA seq
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MKSTNTAQWFPPSQLSFYFDQGAWSRGTTLYLQDQVLCSQLTPDGDGWRLQGQVQGNDAH
PYTVNAELRVSAGGNLSEWRSGCTCPVGRYCKHGAALGILASMQGLALLDEWGPDGPSAE
VLERRSQMEKERALSHAEYQVRDWLNRLENANGPSAYALPGSTHDQFVYSLSVVQTAYKP
VFHLAVKRAAQKRNGEWGKTKKLSSEPSAHDPIWQTSSPLDRDIFDLLKACPPASSFSSY
GFQAEVKLHGMPGKLLLQLCSQTGRLVSDDGIPLRWQDAPEALVGTWREVKSEDHQPDGW
QLSMQPQRPGVVFGLNQPPFFMDTAQGLCGPLDTQGLSANELQVLTNSPVMPESVAFKFQ
NQLLERLGPVPLPPVIQKMPEIRDVKPRAVLDIAPAHPADRGLQGLFLAELTFDYDGHRG
FWPGTQNRVLVGQGLQARMLLRDLPSERKACEAIAALGLITFDANMLVLPPEQSQQRWLE
WVENDFAPLRQAGLDVNFISGGTSWLRQADDVHIDLSGDAEAPETSPWFDLSLGMDIDGE
RVNILPWVPTILTTLAKISHATAEGDKAALPPYLYLPDLQGEGFVKLPTAKIAPWLSTLM
ELVSERGRDWGGDEMRLSRLDALRTAASLGEGVTWAGAQSLMNLVQQMRGLDSLPEVPVP
ASLKATLRPYQQQGLNWLQFLRTHHLAGILADDMGLGKTLQTLAHILTEKEAGRLTQPAL
IVAPVSLLGNWQREAARFCPSLRNHIHHGLSRHETAQDLSGFDIVLTPYSLLHRDRELWI
AIDWHLLVLDEAQNIKNANTHAAQTVGDIPAKHRLCLSGTPMENHLGELWSLFHFLMPGF
LGSQKRFVELFRNPIERQGNSEKMDQLRKRITPFMLRRTKDVVASELPPKIETLMPVPLQ
GQQADLYETIRLGMEKTVRDALNAQGLAKSQITILDALLKLRQVCCDPRLLKLGAASQVQ
QSAKLEQLLDMLPEMVAEGRKILLFSQFTHMLSLIEQELPRLGIPWVKLTGQSKNRDAII
DQFTSGQVPLFLISLKAGGVGLNLPQADTVIHYDPWWNPAVENQATDRAHRIGQTQSVWV
LKLVAQGTIEERMLALQERKAQLAQDMYAGAVQRKEPLFGESDLNELFKPLG
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgaagtccaccaacaccgctcagtggttcccaccctcgcaactgtctttttactttgac
cagggtgcttggtcacgcggcacgaccttgtacttgcaagaccaagtcttgtgttctcaa
ctgacccccgatggcgatggatggcgtttacagggtcaggttcaaggcaacgatgcacac
ccctacacggtcaatgccgagctgcgggtcagtgcgggtggcaacttgagcgagtggcgc
agtggctgcacctgtccggtggggcgttattgcaagcacggtgcagcgttgggcatcttg
gcttcgatgcagggcttggccctcctcgacgaatgggggcccgatggtccatcggccgaa
gtcctggagcgccgctcccaaatggaaaaagagcgggccctgagccacgccgaataccag
gtccgcgactggctgaaccggctggaaaatgccaacggcccaagcgcttacgccttgccc
ggcagcacgcacgaccaatttgtgtacagcttgtccgttgtccaaaccgcttacaagcct
gtgttccatttggccgtgaaacgggccgcacaaaagcgcaatggcgagtggggtaaaacc
aaaaagctcagcagtgaaccctcggcgcacgatccgatctggcaaaccagcagcccgctg
gaccgcgatatttttgacctgttgaaagcttgtccgcctgccagcagtttcagctcgtac
gggtttcaggccgaggtcaagctgcacggcatgcctggcaaattgttgttgcagctgtgc
agccaaaccggtcgtttggtgtcagacgatggcatccctttgcgctggcaagacgccccc
gaagccttggtgggaacctggcgcgaagtcaagagcgaagaccaccagcccgatggctgg
cagctgagcatgcagccgcagcgcccgggcgtggtgtttggtctgaaccaaccgcctttt
ttcatggacacagctcaaggcctgtgtggacctttggacacgcagggcttaagcgccaac
gagctgcaagtcttgaccaactcgcctgtgatgcctgaaagtgtggccttcaagtttcaa
aaccagttgctcgaacgtttgggcccggtgcctttgccacctgtgatccaaaagatgccc
gaaattcgggacgtcaagccccgtgccgtgctcgacattgcgcccgcgcacccggcagac
cgcggcttacagggcttgtttttggccgaattgacgtttgactacgacggccaccgcggc
ttttggccgggcacacaaaaccgcgtcctggtagggcagggtttacaagcgcggatgttg
ctgcgcgacctgcccagcgagcgcaaagcctgcgaggccatcgctgccctgggcctgatc
actttcgatgccaacatgctggtgttgccgcccgagcagtcgcagcagcgctggctggag
tgggttgagaacgactttgcaccgctgcgccaagcgggtctggacgtgaacttcatctcg
ggggggacctcatggttgcgccaagccgacgacgtgcacatcgacttgtcgggtgacgct
gaagcaccggaaacctcaccctggtttgacttgtcgctgggcatggacatcgatggcgaa
cgcgtgaacatcttgccttgggtgcccacgattttgacgacccttgcaaaaatcagccac
gcaacagccgagggcgacaaggcagccttgccgccgtatttgtaccttcccgacttgcaa
ggcgagggctttgtgaaactgcccaccgccaagatcgcgccttggctgagcaccctgatg
gagctggtgtcagagcgtgggcgtgattggggtggtgatgaaatgcgcctgtcgcgcttg
gatgcgctgcgaacggccgcatctttgggcgaaggtgtgacttgggcgggcgctcaaagt
ctgatgaatctggtgcagcaaatgcgtggcctcgacagcctgcccgaggtgcccgtaccc
gccagcttgaaagcgactttgcgaccttaccagcagcagggcctcaattggttgcagttt
ttgcgcacgcaccatctggcgggcatcttggccgatgacatgggcctgggcaaaaccttg
cagaccttggcgcacatcctgaccgagaaagaagcgggtcggctcacgcagccagcactg
atcgtggccccggtgagtttgctcggcaactggcagcgtgaagcggcccgcttttgcccc
agcctgcgcaaccatatccaccatggcctgtcgcgccatgagacggcgcaagacctgagc
ggtttcgacattgtcctgaccccttactctttgttacaccgtgaccgcgagttgtggata
gccatcgattggcacctgctggtgttggacgaagcccaaaacatcaagaatgccaatacc
cacgctgcgcaaaccgtgggcgacatcccggccaagcaccgcctgtgcttgtcgggcacg
cccatggaaaaccacttgggcgagttgtggagcctgttccactttttgatgcccggcttt
ttgggcagccaaaaacgctttgtcgagctgtttcgcaaccccatcgagcgccaaggcaac
agcgaaaaaatggatcagctgcgcaagcgcatcacgcccttcatgctgcgccgcaccaaa
gacgtggtggccagcgagctgccacccaaaatcgaaacgctcatgcctgtgccgctgcaa
ggccaacaggcggacctgtacgaaaccatccgtttgggcatggaaaaaactgtgcgggat
gcgctgaacgcgcagggattggccaaatctcaaatcacgattctggatgcgctgctcaaa
ctgcgccaagtgtgttgcgacccgcgcctgctcaaactgggcgcagccagtcaggtgcag
caatcggccaaactggagcaacttctggacatgttgcccgagatggtggcagaaggacgg
aaaattttgctgttctcgcaattcacccacatgctgagtttgatcgagcaagagttgccg
cgcttgggcatcccctgggtcaagctcacgggccaaagcaaaaaccgcgacgccatcatt
gaccaattcaccagtgggcaggtgccattgttcctcatcagcctcaaagccgggggtgtg
gggctgaacctgccacaggccgacacggtgatccattacgatccttggtggaacccagct
gtagaaaaccaagccactgaccgtgcccaccgcatcggccaaacccaaagcgtgtgggtg
ctcaaactcgtggcccaaggcacgattgaagaacgcatgctggccctgcaagagcgcaaa
gcgcaactggcgcaagacatgtacgcgggtgcggtgcagcgcaaagagccgctgtttggt
gagtcggacctgaacgagttgttcaaacccttgggttga
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