Limnohabitans sp. 63ED37-2: L63ED372_01428
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Entry
L63ED372_01428 CDS
T04121
Symbol
xthA
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
lih
Limnohabitans sp. 63ED37-2
Pathway
lih03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
L63ED372_01428 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lih03400
]
L63ED372_01428 (xthA)
Enzymes [BR:
lih01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
L63ED372_01428 (xthA)
DNA repair and recombination proteins [BR:
lih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
L63ED372_01428 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
ALK88637
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All DBs
Position
1487831..1488610
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AA seq
259 aa
AA seq
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MKIATWNVNSLSVRLPQVLDWLAANPTDVLALQELKLTDDKFPAAALAEVGYQAQWFGQK
TYNGVALISKVGGADVVKNIPGFEDDMSRVIAATYPDGAGGTVRVIGAYFPNGQAPDSDK
FVYKMRWLDALREWVGSEMQKHPNLVLLGDYNITFDELDMWDPVALAGTIHCTDAEREKL
QGLIGLGLTDSFRLFEQPEKSYSWWDYREFAFRRNRGLRIDHILISQALKARARACMIDR
APRKNERPSDHAPVVLTLA
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgccacttggaacgtcaactccttgtctgtgcgcctgccgcaagtactggac
tggttggccgcgaatccgaccgatgtgctggccttacaagaactcaaactgacagacgac
aagtttccagccgccgccttggccgaagttggctaccaagcgcaatggtttggtcaaaaa
acttacaacggtgtggccctgatttccaaagtcggtggtgccgatgtggtgaaaaacatc
ccaggctttgaagacgacatgtcgcgcgtcattgccgccacctaccccgatggcgcggga
ggtacggtgcgggtgatcggtgcgtatttccccaacggccaagcgcccgacagcgacaag
tttgtctacaaaatgcgctggttggatgcgctgcgcgaatgggtgggcagcgagatgcaa
aaacacccgaacttggtgctgctgggtgattacaacatcacctttgacgaactcgacatg
tgggatccggtggctttggcaggcaccatccactgcaccgacgcggaacgtgagaagctg
caaggcctgatcggcttgggcctgaccgacagcttccgactgtttgagcaacccgaaaaa
agttacagctggtgggattaccgcgaatttgccttccgccgcaaccggggcttgcgcatc
gaccacatcttgatttcgcaagcactgaaggcccgcgccagagcctgcatgattgatcgc
gcccctcgcaaaaatgagcgccccagcgaccacgcgcccgtggtgctgacgctggcctga
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