Limnohabitans sp. 63ED37-2: L63ED372_01485
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Entry
L63ED372_01485 CDS
T04121
Symbol
tcdA
Name
(GenBank) tRNA threonylcarbamoyladenosine dehydratase
KO
K22132
tRNA threonylcarbamoyladenosine dehydratase
Organism
lih
Limnohabitans sp. 63ED37-2
Brite
KEGG Orthology (KO) [BR:
lih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lih03016
]
L63ED372_01485 (tcdA)
Transfer RNA biogenesis [BR:
lih03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
L63ED372_01485 (tcdA)
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Gene cluster
GFIT
Motif
Pfam:
ThiF
DAO
Sacchrp_dh_NADP
NAD_binding_7
Cons_hypoth95
3HCDH_N
UDPG_MGDP_dh_N
KR
ApbA
AlaDh_PNT_C
ETF
ELFV_dehydrog
2-Hacid_dh_C
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
ALK88693
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Position
complement(1554719..1555513)
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AA seq
264 aa
AA seq
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MMDADNDESTRRFGGVQRLYGMAGASRIQQSHVVVVGIGGVGSWTAEALARSGVARLTLV
DMDHISESNINRQIHALSNTTGQSKVLAMQERIALIHPQCQVDVVDDFVTPENWPELLPC
KPDALVDACDQVKAKVSLAQWALDEGLGFITVGAAGGKRLAHKVDVDDLSRITHDPLLAQ
LRYRLRKHHGAAKGGKSIGILGVFSREAVAPPDASCAIEGDGSLNCHGYGSVVSVTATFG
MCAASEILNFLAVSPRGRKNDAII
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgcagacaacgatgaaagcactcgccgctttgggggggtgcaacgcctttat
ggcatggccggggccagtcgcatacaacaatcgcatgtggtggtggtcggcatcggtggg
gtgggctcctggaccgcagaagctttggcacgcagtggcgtggcgcgtttgacccttgtc
gacatggaccatatttccgagtccaacatcaatcgccaaattcatgccctcagcaacacc
acgggccaatccaaagtgttggccatgcaagaacgcattgccttgattcacccgcaatgc
caagtcgatgtggtggatgattttgtgacgcccgagaactggcctgagctcttgccctgc
aagcccgatgccttggtcgatgcctgcgaccaggtcaaagccaaagtgagcctggcgcaa
tgggccttggacgaaggcctgggcttcatcaccgtgggcgctgcgggtggcaaacgcttg
gcgcacaaggtggatgtggacgacctctcgcgcatcacgcacgacccgctgttggcccag
ctgcgttaccgcctgcgcaaacaccacggggcggccaaaggtggcaagagcatcggtatt
ctgggcgtgttcagccgcgaagccgtggcaccacccgatgcctcgtgtgcgatcgaaggc
gacggctcgctcaattgccatggctacggatcggtggtgagcgtgaccgcgacctttggc
atgtgcgcggcctcagaaattttgaattttttagcggtcagcccgagagggcgaaaaaat
gacgctataatttga
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