Limnohabitans sp. 63ED37-2: L63ED372_01635
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Entry
L63ED372_01635 CDS
T04121
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
lih
Limnohabitans sp. 63ED37-2
Pathway
lih03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
L63ED372_01635 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lih03400
]
L63ED372_01635 (alkA)
Enzymes [BR:
lih01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
L63ED372_01635 (alkA)
DNA repair and recombination proteins [BR:
lih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
L63ED372_01635 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
DUF4473
HHH
Motif
Other DBs
NCBI-ProteinID:
ALK88841
UniProt:
A0A0P0M989
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All DBs
Position
complement(1711864..1712514)
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AA seq
216 aa
AA seq
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MTLSPSLEVIPVTPAYWAEACAHLAKKDRVMKKLIPQFGDAILETRGDAFVTLARSIVGQ
QISVKAAQSVWDRFSALSKRLTPAAVLKLKVDDMRAAGLSARKVEYLVDLAVHFSSGTVH
VKAWHEMDDEAIIDELVAIRGIGRWTAEMFLIFHLLRPNVLPLDDVGLINGISRNYFSGE
PVSRSDAREVAQAWSPYSTVATWYIWRSLDPVPVAY
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
gtgacgctcagccccagcctggaggtgatccctgtgacgcccgcttactgggcggaggcc
tgtgcgcacctggccaaaaaagaccgggtcatgaaaaaactcatcccccagtttggcgat
gccattctcgaaacccggggcgacgcatttgtgaccttggcccgctccatcgtgggccag
caaatttcggtcaaggccgcccaatcggtgtgggaccggttttctgccctgtccaagcgc
ctgacgccagccgctgtgctcaaactcaaagtggacgacatgcgcgctgcgggtttgtcg
gctcgcaaggtcgagtacctggtcgatctggccgtgcacttcagctcgggcacggtgcat
gtcaaggcttggcacgagatggacgacgaggcgatcatcgacgagttggtggcgattcgc
ggcattggccgctggacggccgagatgtttttgatctttcatctgctgcggcccaatgtg
ctgccgctcgacgatgtgggcttgatcaacggcatcagccgcaattatttttcgggtgaa
cccgtcagccgcagtgacgcccgagaagtcgcacaagcctggagcccgtattccaccgtg
gcaacttggtatatttggcgctcgctggaccccgtgccagtggcgtattga
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