Limnohabitans sp. 63ED37-2: L63ED372_01670
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Entry
L63ED372_01670 CDS
T04121
Symbol
ntcA
Name
(GenBank) Global nitrogen regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
lih
Limnohabitans sp. 63ED37-2
Pathway
lih02020
Two-component system
lih02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lih00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
L63ED372_01670 (ntcA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
L63ED372_01670 (ntcA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lih03000
]
L63ED372_01670 (ntcA)
Transcription factors [BR:
lih03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
L63ED372_01670 (ntcA)
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Ortholog
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GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
GntR
MarR_2
HTH_24
HTH_3
Phage_rep_O
Motif
Other DBs
NCBI-ProteinID:
ALK88876
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Position
1744474..1745193
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AA seq
239 aa
AA seq
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MDEPILTMEEREAINSGRWFSSLSPSLRHDILRCAYVKRHKDGDMLAARGDPPEQWIACA
KGAVRVSSTSVSGKQITLTYVEPGIWFGDVSIFDGDRRTHDCYAHGETTTLNVAKADFKK
ILTQHVEFYDAMLRLHARRIRQLYGLVEDLNTLPLRARLAKQLNHLLRSYGVPSLSDAKA
IRISLQLAQEELAQLLGASRQRVNQELKQMEREQIIRIEPGGLVVLDRDALLLIVNADH
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaccgattctgacaatggaggaacgagaggcgatcaacagtggtcgctggttc
tcaagcctttcaccttcacttcgacacgacatacttcgatgcgcttacgtcaaacggcac
aaggacggcgatatgctcgctgcgcggggagatccgcccgagcagtggatcgcctgcgcc
aagggcgcggtgcgtgtgagctcaacgtcggtgtctggcaagcagatcaccttgacctat
gtggagccgggcatctggtttggcgatgtatcgatcttcgacggggatcgccgcacacac
gactgttatgcacatggcgagacgaccacgctcaacgtggccaaggccgacttcaagaaa
atcctgacgcagcacgtcgagttttacgacgccatgctgcgcctgcatgcccggcgcatt
cgccagctctacggcttggtggaagacctcaacaccctgcccttgcgggctcggctggcc
aaacaactcaaccacttgctgcgcagctacggcgtgcccagtttgtcggatgccaaggcg
attcgcatcagcttgcaactggcacaggaagaactggcccagctgctgggtgcatcgcgc
caacgggtcaaccaggaactcaagcagatggagcgcgagcaaatcatccgcatcgagccc
ggtggcttggtggtgctggaccgcgatgcgctgctgctgatcgtgaacgcggaccactga
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