Limnohabitans sp. 63ED37-2: L63ED372_01693
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Entry
L63ED372_01693 CDS
T04121
Symbol
recC
Name
(GenBank) RecBCD enzyme subunit RecC
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
lih
Limnohabitans sp. 63ED37-2
Pathway
lih03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
L63ED372_01693 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lih03400
]
L63ED372_01693 (recC)
Enzymes [BR:
lih01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
L63ED372_01693 (recC)
DNA repair and recombination proteins [BR:
lih03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
L63ED372_01693 (recC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ALK88899
UniProt:
A0A0P0LIQ3
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All DBs
Position
complement(1770009..1773503)
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AA seq
1164 aa
AA seq
DB search
MPASSISPGFIALHSHRSEVLADTLTGWLRTHPLLPLESEVVLVQSNGMAEWIKIELARQ
GGVCAATRVELPSRFLWRTYRQVLGAANVPPDSPLDKLPMTWRLMALLPSCLQDPVFQPV
AGFLRGDEPDRLLQLASRLADLFDQYQIYRPDWLQDWAAGRNLLRKAAGHDELGEDQLWQ
AELWRRVLDTLDDSQRQATRPALHARALAHLQSGQPLASPVARRVSVFGMSHMPGQLLEM
LAALAAHSQVLLAVPNPCQYHWGDIIDGREWLQAERRRHAYRGEALAGLPLAQMHLHAPT
LLAAWGRQGRDFIRQLDAFDDLQAAQQVTQWPRLDFFDDVPGEDATRLLAQLQRRIRDLE
PSSGGTPAQPLRKDDASVTFSVAHSPVRELEVLHDQLLQWFHTSPEPLSPRDVVVMVPDI
EVMAPAIRAVFGQYKRSDARFIPYDIADLGAQAISPLIHAVEWLLALPQQRSRMSELVEL
LEVPALAARFGLKDEHLPTLTRWMAGSGIRWGLSAEHRAGLGLGVCGDDNSALFGVQRML
MGYACGADPVDDGVSLGVSPYFEVGGLDAELAGSLAHLLQALIDWWQICTQSATPAQWAE
HCRAMLAALFKPRDDNDRNALAALDQALNDWVRACGEAGFEEAVPLAVTRSAWLEALKAP
RLEQRFRAGGVTFCTLMPMRAIPFKAVCLLGMNDGDYPRRSPRADFDLMGLPGMTRPGDR
SRRDDDRQLMLEALLSARQVLYVSWSGRSVRDNSEQPPSVLVSQLRDEIDLLWGKDTAKG
LTTVHPLQPFSRAYFEAGSGLLTYAKEWRAAQDVQRGDGASETGTPSSALALLSPLMAAN
EQAPIISIAQLARFLRKPVGAFFRERLQVHLEDERSELHDEELFGLGGLDLYQLLDHELQ
HVPADLIADELPSHAARVVQQLREAGALPLAGVGTLEAQKLTHILQTQLAAALRECGAYP
EAAERVLVDQTHPQVSLQDALGGVLAGEGGQMLLSLRANDVADLKPKTPLARPEKLIDIW
LQSLAAAAVGHSVRCVVVGRNAVVRAEPQDPEAARTQLQTLLAIWAEGMRWPLPLPPGVA
LQWLKDKENTNALADAYEGSDFKSAEKDKDPALARTYPTVQDLLATGALDRLAQAVYAPL
KAWAAEAEVEALPGAPADDEGEKA
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcatcctccatttcgcccggcttcattgccctgcacagccaccgctctgaggtg
ctggccgacaccctgacgggctggttgcgcacacaccctttgctgccgctcgagagcgaa
gtggtgctggtgcaaagcaacggcatggccgagtggatcaagatcgagttggcccgccaa
ggtggcgtgtgcgccgccacgcgggtggagctgccttcgcgctttttgtggcgcacttac
cggcaggtgctgggcgcggccaatgtgccacccgactcaccgctcgacaaactgcccatg
acctggcggctgatggccttgttgcccagctgtctgcaagacccggtgttccagcccgtg
gcgggctttttgcgcggcgacgagccggaccgcctgctgcaactggccagccgattggcc
gacctgtttgaccagtaccaaatctaccgccccgactggctgcaagactgggccgccggg
cgcaacttgctgcgcaaggccgctgggcatgatgagctgggcgaagaccagctttggcag
gcggaactctggcggcgcgtgctcgacactttggatgacagccagcgccaggctacccgc
ccggcgctgcatgcgcgggcgctggcgcacctgcagtcgggccagccgctggccagcccc
gtggcgcggcgcgtgtcggtgtttggcatgagccacatgcccgggcagctgctggagatg
ctggcggcgctggccgcgcacagccaggtgctgttggccgtacccaatccgtgtcagtac
cactggggtgacatcatcgacgggcgcgaatggctgcaggccgagcggcgacgtcacgcc
taccggggcgaggcgttggcgggtttgccactggcgcagatgcatttgcacgcgcccacg
ctcttggccgcttgggggcggcaggggcgcgacttcatccgccagctcgacgcttttgac
gacctgcaggcggcccagcaagtcacgcagtggccgcgcctggacttttttgacgatgtg
cccggtgaagacgccacgcgtttgctcgcgcagttgcagcgccgcatccgcgacctggag
ccgtcgagcggcggcactccagcccagcctttgcgcaaggacgacgcttcagtcaccttc
agcgtggcgcacagcccggtgcgcgaactcgaagtgctgcacgaccagttgctgcagtgg
ttccacacctcgcccgagcctttgtccccacgcgatgtggtggtcatggtgcccgacatc
gaagtcatggccccggcgatccgcgcggtgtttggtcaatacaagcgcagcgatgcgcgg
ttcatcccgtatgacattgccgacctgggtgcacaggccatcagcccgctgatccatgcg
gtcgaatggttgctggccctgccgcagcagcgcagccgcatgagcgagctggtggagctg
ctcgaagtgcccgcgctcgctgcccgctttggcttgaaggacgaacacctgcccacgctc
acgcgctggatggcgggctcgggcatccgttggggcctgtctgccgagcaccgcgctggc
ttggggctgggcgtgtgcggcgacgacaactcggcgctgtttggcgtgcagcgcatgctc
atgggttatgcctgcggtgccgacccggtggacgatggcgtttcattgggcgtgtcgcct
tactttgaggtgggcgggctggacgccgaactggccgggtcgctggcgcacctgttgcag
gccctgatcgactggtggcaaatctgcacgcaaagcgccacgcccgcacagtgggccgag
cattgccgcgccatgctcgcggcgctgttcaagccgcgtgacgataacgaccgcaatgcc
ctggcagcgctcgaccaagcgctgaacgactgggtgcgtgcttgcggcgaagcgggtttt
gaagaggctgtgccgctggccgtgacccgatcggcttggcttgaagctttgaaggccccc
cggctggagcagcgctttcgcgctggcggcgtgacgttttgtacgctcatgccgatgcgg
gcgatcccgttcaaggcggtgtgcctgctgggcatgaacgatggcgactacccgcgccgc
agcccgcgtgccgactttgacctgatgggactgcccggcatgacgcgccccggcgaccgc
tcgcgccgtgacgacgaccggcagctcatgctcgaagcgctcttgtcagcgcggcaggtg
ctgtacgtgagctggagtggccgcagcgtgcgcgacaacagcgaacaaccgccttcggtg
ctggtgtctcaactgcgcgacgagatcgatctgctctggggcaaagacacggccaaaggc
ctgaccaccgtgcacccgctgcaacccttcagccgcgcttactttgaggcgggcagtggt
ttgttgacctatgccaaagagtggcgggcggcgcaagatgtccagcgtggtgatggggca
agcgagacgggcacgccatcgtcggctcttgcgctgttgtcgccactcatggccgccaac
gagcaggccccgatcatctcgatcgctcaactggcgcgcttcctgcgcaaacctgtgggt
gcgttttttcgtgagcggctgcaggtgcatttggaagacgagcgcagcgagctgcacgac
gaagaactgtttggtctgggcgggctggacttgtaccagttgctcgaccacgaactgcag
cacgtgcctgcggatttgatcgcagacgaactgcccagccatgcagcgcgtgtggtgcag
caattgcgtgaggccggggccttgccgctggcgggggtgggcacgctcgaagcccaaaag
ctcacccacatcctgcaaacccaactggccgctgcgctgcgcgagtgcggggcctacccc
gaagctgccgagcgtgtgctggtcgaccagacacacccgcaagtgagtttgcaagacgct
ttgggcggcgtgctggcgggtgagggtgggcaaatgctcttgagtttgcgtgccaacgac
gtggcggacctcaaacccaaaacacctttggccagacctgaaaaactcatcgacatttgg
ctgcagtcgctggccgctgccgccgtggggcattcagtgcgctgtgtggtggtgggccgc
aacgccgtggtgcgtgcagaaccgcaagaccctgaagccgcccgcacccagttgcagacc
ttgctggccatctgggccgaaggcatgcgctggccactgcccctgccgcccggcgtggcc
ttgcagtggctcaaggacaaagaaaacaccaacgcgctggccgatgcctacgaaggcagc
gacttcaagagcgcagaaaaagacaaagacccggcgctggcccgaacctaccccacggtg
caggatttgctggccacgggcgcactggatcggctggcgcaggcggtgtatgcgccgctc
aaagcttgggcggcagaggccgaagtcgaggccttgcccggtgcgcctgcagacgatgag
ggagaaaaggcatga
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