Limnohabitans sp. 63ED37-2: L63ED372_01919
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Entry
L63ED372_01919 CDS
T04121
Symbol
sdhA
Name
(GenBank) Succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
lih
Limnohabitans sp. 63ED37-2
Pathway
lih00020
Citrate cycle (TCA cycle)
lih00190
Oxidative phosphorylation
lih00650
Butanoate metabolism
lih00720
Other carbon fixation pathways
lih01100
Metabolic pathways
lih01110
Biosynthesis of secondary metabolites
lih01120
Microbial metabolism in diverse environments
lih01200
Carbon metabolism
Module
lih_M00009
Citrate cycle (TCA cycle, Krebs cycle)
lih_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
lih_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
lih00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
L63ED372_01919 (sdhA)
00650 Butanoate metabolism
L63ED372_01919 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
L63ED372_01919 (sdhA)
00720 Other carbon fixation pathways
L63ED372_01919 (sdhA)
Enzymes [BR:
lih01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
L63ED372_01919 (sdhA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Thi4
HI0933_like
Pyr_redox_2
FAD_binding_3
GIDA
Pyr_redox_3
FAD_oxidored
ThiF
NAD_binding_7
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
ALK89123
UniProt:
A0A0P0MA27
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All DBs
Position
2007304..2009109
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AA seq
601 aa
AA seq
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MSYTKDKITTRKFDVVIVGAGGSGMRASLQLARAGLNVAVLSKVFPTRSHTVAAQGGIGA
SLGNMSDDNWHYHFYDTIKGSDWLGDQDAIEFMCREAPKVVYDLEHMGMPFDRNPDGTIY
QRPFGGHTANYGEKPVQRACAAADRTGHAMLHTLYQQNVAAKTSFFVEWMALDLIRDAEG
DVVGVTALEMETGDLHVLHAKTVLMATGGAGRIYAASTNAFINTGDGLGMAARAGIPLED
MEFWQFHPTGVAGAGVLLTEGCRGEGAILLNSNGERFMERYAPTLKDLAPRDFVSRCMDQ
EIKEGRGCGPNKDYVLLKLDHLGADTIHKRLPSVYEIGVNFANVDITKEPIPVVPTIHYQ
MGGIPTNINGQVVTQNATDHNAVVNGLYAVGECSCVSVHGANRLGTNSLLDLLVFGRAAG
NHIVDFASKTKSHKPLPADAADYTLSRLNKLEGRGGEYAQDVANDMRATMQQHAGVFRTQ
ASMDEGVQKIAAIRERVNAIGLKDTSKVFNTARIEALEVDNLIEAAQSTMVSAAARRECR
GAHTVSDYERPVDDAVAPLGRDDANWMKHTLWHSADNSLTYKPVKLKPLTVDSVPPKVRT
F
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgagctataccaaagacaaaatcaccacccgcaagtttgacgttgtcatcgtcggcgcc
ggtggatcgggcatgcgtgcctcgctgcagctggcccgtgctggcctcaatgtggcggtc
ctgtccaaagtgttcccgacacgttcacacactgtggccgcccaaggcggcatcggtgcc
agcctgggcaacatgtccgacgacaactggcactatcacttctacgacaccatcaagggc
tccgactggctcggcgaccaagatgcgattgaattcatgtgccgtgaagcgcccaaggtc
gtgtacgacctcgagcacatgggcatgccttttgaccgcaaccccgatggcacgatttac
cagcgcccattcggcggccacaccgccaactacggtgaaaagcctgtgcagcgcgcctgt
gctgccgctgaccgcaccggtcacgccatgctgcacaccctgtaccagcaaaacgtcgcg
gccaaaaccagcttcttcgtcgagtggatggcactcgatctgatccgcgacgccgaaggc
gacgtggtcggtgtgaccgccctcgagatggaaaccggtgacctgcatgtcttgcatgcc
aagaccgtgctgatggccacaggtggcgcaggccgcatttatgccgcttccaccaacgcc
ttcatcaacacaggtgacggcctgggcatggccgctcgcgcaggcattcctctggaagac
atggagttctggcaattccaccccaccggcgtggccggcgctggcgtgctcttgaccgaa
ggctgccgcggcgaaggcgccatcttgctcaacagcaatggcgaacgcttcatggagcgc
tatgcgcccaccctgaaagatttggccccgcgtgacttcgtgtcccgctgcatggaccag
gaaatcaaggaaggccgtggctgtggcccgaacaaggactacgttctgctcaagctggac
cacctgggtgccgacaccatccacaagcgcctgccctcggtgtacgaaatcggcgtcaac
ttcgccaacgtcgacatcaccaaagagccgatccctgtggtgcccaccatccactaccag
atgggcggcatcccgaccaacatcaacggccaggtcgtgacgcaaaacgccaccgaccac
aacgccgtggtcaacggtttgtatgccgtgggcgaatgctcttgcgtgtcggtgcacggc
gccaaccgcctgggcaccaactcgttgctcgacttgctggtgtttggccgcgctgccggc
aaccacatcgttgactttgcctccaaaaccaagtcgcacaagccattgccggcagacgcc
gctgactacacactgagccgcttgaacaagctcgaaggccgtggcggcgaatacgcccaa
gacgtggccaacgacatgcgcgccaccatgcagcaacacgctggcgtgttccgcacccaa
gcctccatggacgagggcgtgcaaaagattgctgccatccgcgaacgcgtcaatgccatc
ggcctgaaggacacttccaaagtgttcaacaccgcccgcatcgaagccttggaagtggac
aacctgatcgaagccgcgcagtccaccatggtgtctgccgctgcccgccgtgagtgccgt
ggtgcccacaccgtgagcgactacgagcgccccgtggacgacgccgtggccccactgggt
cgcgacgacgccaactggatgaagcacaccctgtggcacagcgccgacaacagcctgacc
tacaagccggtcaagctcaagcccctcactgtggactccgtgccacccaaggttcgtacc
ttctaa
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