Limnohabitans sp. 63ED37-2: L63ED372_02028
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Entry
L63ED372_02028 CDS
T04121
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
lih
Limnohabitans sp. 63ED37-2
Pathway
lih03030
DNA replication
lih03430
Mismatch repair
lih03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L63ED372_02028 (dnaX)
03430 Mismatch repair
L63ED372_02028 (dnaX)
03440 Homologous recombination
L63ED372_02028 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lih03032
]
L63ED372_02028 (dnaX)
03400 DNA repair and recombination proteins [BR:
lih03400
]
L63ED372_02028 (dnaX)
Enzymes [BR:
lih01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L63ED372_02028 (dnaX)
DNA replication proteins [BR:
lih03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
L63ED372_02028 (dnaX)
DNA repair and recombination proteins [BR:
lih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
L63ED372_02028 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_18
AAA_14
AAA_16
AAA_5
Rad17
AAA_7
AAA_30
AAA_19
SKI
TsaE
nSTAND3
AAA_2
Herpes_Helicase
DUF815
NTPase_1
PIF1
APS_kinase
AAA_28
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
ALK89231
UniProt:
A0A0P0MAA6
LinkDB
All DBs
Position
complement(2119088..2121046)
Genome browser
AA seq
652 aa
AA seq
DB search
MSYLVLARKYRPRNFTEMVGQEHVVQALTNALVQQRLHHAYLFTGTRGVGKTTVSRILAK
SLNCQGVDGLGGITAEPCGVCQACRDIDAGRFVDYTELDAASNRGVDEVQSLLEQAVYKP
VQGRFKVFMIDEVHMLTNTAFNAMLKTLEEPPEYLKFVLATTDPQKVPVTVLSRCLQFNL
RPMAPETVFEHLTQVLAAEQLSAEPLALRLLARAARGSMRDALSLTDQAIAFGNGQLQEA
GVRQMLGSVDRSHVLQLIRALAEGDGATVVNQVNALRLQGVSAAATLEDMAMLLQRMAVM
QMVPSMAHDGEDPDTQGLADLAQAMPAEETQLLYSLCLHGRTELGLAPDEYAALTMVLLR
LLAFKPPAGTAEKKSPLSSPSSPPSASASPRAEVFAAPQPAPESAPLNKPLTAPVTAPAS
APLTVPKAAPVVLDSPPPVAAAPQVTPISPPPAAQPAPLASDEPPPWEDWPDTTDYADQG
GLTSAPAVVAPTPAALRALPVREAPEPSSRLDMPRAAAPAAVQPTPEGDVWMAVVQGLLD
QETITALVRELALQSQLLGRDGAQWQLRVERETLNHAASRERLQAALLAAGHGDVKLHIE
IGPVSDSPARRLAVKAAEKMLAAQELIQNDPLVQAMVRDFGAKIVPGSIQLI
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgtcttaccttgtcctcgcgcgcaaataccgcccccgcaatttcaccgaaatggtgggg
caggagcatgtggtgcaggccttgaccaatgccttggtgcagcagcgcctgcaccatgcc
tacctgttcaccggtacccggggcgtgggcaagaccacggtgtcgcggattttggccaag
tcgctcaattgccagggcgtggacgggctgggcgggatcaccgctgagccgtgcggcgtg
tgccaggcttgccgcgacatcgacgccggtcgttttgtggactacaccgagctggatgcc
gcatcgaaccggggtgtggacgaggtgcaaagcctgctggagcaggcggtttacaaacct
gtgcaggggcgcttcaaggtcttcatgatcgacgaggtgcacatgctgaccaacactgcg
ttcaacgcgatgttgaagaccctggaagagcccccagaatatttgaagttcgtgctggcc
acgaccgacccgcaaaaggtgccggtgacggtgctctcgcgctgcctgcagttcaacctg
cggcccatggcccccgaaaccgtgtttgagcacctgacccaggtcttggcggctgagcag
ctgagcgccgagccgctggctttgcgcctgctggcccgcgccgctcgcggctcgatgcgg
gatgcgctcagtctgaccgatcaggccattgcctttggcaacggccaattgcaagaagcg
ggcgtgcgccagatgctgggcagtgtggaccgcagccatgtcttgcaactcatccgggct
ctggccgaaggcgatggggccaccgtggtgaaccaagtcaacgctttgcggctgcaaggc
gtgtcggccgccgccacactcgaagacatggccatgctgctgcagcgcatggcggtgatg
cagatggtgcccagcatggcgcacgacggcgaagaccccgacacccagggtttggccgat
ctggcccaagccatgcccgccgaagaaacccaattgctctacagcctgtgcctgcatggc
cgcaccgagttgggcctggccccggacgagtacgctgcgctgaccatggtgttgctgcgc
ttgttggccttcaagcccccagcgggaacggcggaaaaaaaaagcccgctgagcagccct
agttccccaccaagcgccagcgccagcccccgggccgaagtgttcgctgcaccccagcca
gcgccagaatctgcgcccctgaataaaccactcaccgccccggtcactgccccggcatct
gcccccttgacagtgcccaaggccgccccagtggtgttggacagcccgccacccgtcgcc
gctgcaccccaggtcacacccatttcaccccccccggctgcgcagccagcaccgctggcc
agcgacgagccgccgccttgggaggattggcccgacacgaccgactatgccgatcaaggc
ggtctgacttcagccccggcagtggtggccccaacgcctgcggccttgcgtgctttgccc
gtgcgtgaagcgcctgaaccctcgtcgcgcttggacatgccccgcgcggcggcccctgct
gcggtgcagcccacccccgaaggcgatgtctggatggcggtggtgcaaggcctgttggac
caagagaccatcaccgcactggtgcgagagttggctttgcagtcgcaattgttggggcgc
gatggtgcgcagtggcagctgcgtgtggagcgcgaaaccctgaaccacgccgccagccgg
gagcggctgcaagcggctttgctggcagcgggccatggcgatgtgaaactgcacatcgag
atcggcccggtgagcgacagcccagcccgacgcctggccgtgaaagccgccgagaaaatg
ctggccgcgcaagagctcattcaaaacgaccccttggtgcaggcgatggtgcgtgatttt
ggggccaaaattgtgcccggcagcatccagctgatttga
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