KEGG   Limnohabitans sp. 63ED37-2: L63ED372_02061
Entry
L63ED372_02061    CDS       T04121                                 
Symbol
vapC_2
Name
(GenBank) tRNA(fMet)-specific endonuclease VapC
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
lih  Limnohabitans sp. 63ED37-2
Brite
KEGG Orthology (KO) [BR:lih00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lih03016]
    L63ED372_02061 (vapC_2)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:lih02048]
    L63ED372_02061 (vapC_2)
Transfer RNA biogenesis [BR:lih03016]
 Prokaryotic type
  tRNA degradation factors
   L63ED372_02061 (vapC_2)
Prokaryotic defense system [BR:lih02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    L63ED372_02061 (vapC_2)
SSDB
Motif
Pfam: PIN
Other DBs
NCBI-ProteinID: ALK89264
UniProt: A0A0N7J8V7
LinkDB
Position
2152571..2152978
AA seq 135 aa
MIKFLVDTNILGYFARNSSAALQTRMLAALKKQEIAISAITRAETRFGQALLQPEDKRRR
TIDLLLNELPVLPWTLEAADRYGEIAAHLQQTGQPIGDMDTQIAAHALALGLPLVTHNTR
HFKRVPGLKIEDWMT
NT seq 408 nt   +upstreamnt  +downstreamnt
gtgatcaagtttttggtggacaccaacatcttgggctactttgcacgcaacagctctgca
gcgctgcaaacgcgcatgttggcggcgctcaaaaagcaggagatcgccatctccgccatc
acccgcgccgaaactcgctttgggcaggccctgcttcaacccgaagacaaacgccgccga
accattgatttgctgctcaatgagttgcccgttttgccatggacgctggaggccgcagac
cgctatggagaaattgccgcccacctgcaacaaaccgggcaacccattggcgacatggac
acccaaatcgccgcgcacgcattggcgctgggcctgcccttggtgacccacaacacacgg
cacttcaagcgggtgccaggtttgaaaattgaggactggatgacgtga

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