Limnohabitans sp. 63ED37-2: L63ED372_02082
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Entry
L63ED372_02082 CDS
T04121
Symbol
cirA_1
Name
(GenBank) Colicin I receptor precursor
KO
K16089
outer membrane receptor for ferrienterochelin and colicins
Organism
lih
Limnohabitans sp. 63ED37-2
Brite
KEGG Orthology (KO) [BR:
lih00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lih02000
]
L63ED372_02082 (cirA_1)
Transporters [BR:
lih02000
]
Other transporters
Pores ion channels [TC:
1
]
L63ED372_02082 (cirA_1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ALK89285
LinkDB
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Position
complement(2166099..2168300)
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AA seq
733 aa
AA seq
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MRSLQPHPNLHPLTHSLLLAGVVLYWLPVWAWAQSPAPAASSATPSATADLGQVEIRSNR
NNDTEVRRESSASKIVIGREEIEKQGDSTLGEVLKRLPGVTVQGAPGRGGAIRMRGLGGG
YTQILLDGERVPPGFSIDTLTPEQVEKIEILRAPTAETGARAIAGTINIVLREGQKANPD
DLKITRSQEHGEGSSMLSWVHNLKTQPLSGTVTLSLMDQYRPDESTSVITSEPGDDRIRF
NESVGRRKALHGNARLQWKGEQGRTLTLTPFVVYSDYTSPGQVQIRETEGGLRTDSAQTL
NQSIFAMARLNGQWAQRLSADDRLEVRFGLGQSKYDFRLDQTGAADVLLFNSFETQNFVD
RTGSLNGKWTRAMDNGHQIVSGLELETVRRVEEANAAVDEDGGDIRARTLRWAAYTQDEF
KINANWSAYTGLRYESILTEGTSELGLKSNTSSVWTPLLHALWKPDPAKRDQVRMSLTRS
YKTPTLYNLVARPVPSREANSPTRPDRVGNPDLKPEMATGIDMAFERYLSGGGVLSANVF
HRQISDLIRYTVAQQNSPSWAPGQDRWVSSPINLGDATTQGIELEAKFRLDQVRAGALPV
DIRSNLSLFSSRVKQVPGPDNRLDQQPGMTANLGADYRVRSIPLTVGGNVNWNPDYDTRR
SEQQWAYQGTKRVLDVYGQWRFSAATALRLTVSNLTPRDYLTASTYSGNGVSETSRNTTP
NWRNVQLRLEMKI
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgcgttcacttcaaccccatcccaaccttcatcccctgacccacagcctgctgctcgct
ggggtcgtcctgtattggctgcctgtctgggcttgggctcaaagccctgcccctgcggcg
tccagcgccacgccatctgccacggccgatctgggccaggttgagatccgcagcaaccgc
aacaacgacaccgaggtgcgccgtgagtcttcggcctccaaaatcgtcattggtcgcgaa
gagatcgaaaaacaaggcgactccacattgggtgaggtgctcaagcgcttgccgggtgtc
acggtccaaggtgcgcccggtcgaggcggcgccattcggatgcggggcctgggcggtggc
tacacccagatcctgctcgacggtgagcgcgtgccgccaggtttttccatcgacacactc
acccctgagcaggtcgaaaaaatcgagattttgcgtgcccccacggccgaaactggggcc
agggccattgccggcaccatcaacatcgtcctgcgcgagggtcaaaaagccaaccccgat
gacctcaaaatcacccgcagccaagagcatggcgagggctcgtccatgctcagctgggtg
cacaacctcaagacccagcccttgagcggcaccgtgaccctgtccttgatggaccagtac
cggccagacgaaagcacatcggtcatcacctcagagcctggcgatgaccgcatccgtttc
aatgaatcggtgggccgccgcaaagccctgcatggcaatgcccgcttgcagtggaaaggt
gagcagggccgtaccctcacgctcaccccctttgtggtgtattcggattacaccagcccc
gggcaagtgcagatccgcgagactgagggcggcttgcgcaccgacagcgcccagacactg
aaccaaagcatttttgccatggcccgtttgaacggccaatgggcccagcgcctgtcggcc
gatgaccggctggaggtgcgctttggtctgggccagtccaagtacgactttcgcctggac
cagacgggggcagccgatgtgctgctgttcaacagctttgagacacaaaactttgtcgac
cgcacgggcagcctgaacggcaaatggacccgcgccatggacaacggacaccagatcgtg
agcggtctggagctcgaaacggtgcgccgtgtggaagaggccaacgccgcagtcgacgag
gacggtggcgacatccgcgcccgcaccttgcgctgggccgcttacacacaagacgaattc
aagatcaacgccaactggtcggcctataccggcctgcgctacgaatccatcctgaccgaa
ggcacaagtgagttgggcctcaagtccaacaccagctcggtctggacgcctttgctgcac
gccttgtggaagcccgacccggccaagcgcgatcaggtgcgcatgagcctgacacgcagc
tacaaaacgcccaccctctacaacctggtggcacggcccgtgccctcgcgcgaggccaac
agccccacccgccccgaccgtgtcggcaaccccgacttgaagcccgaaatggccaccggc
atcgatatggcctttgagcgctacctgagcggcggtggcgtgctcagcgccaacgtgttt
caccgccagatcagcgacctgatccgctacaccgtggctcagcaaaacagcccctcttgg
gcgcccggtcaagaccgctgggtgtcctcgcccatcaacttgggcgatgccaccacgcag
ggcatcgagctcgaagccaagttccgtttggaccaggtgcgggctggggccttgcctgtg
gacatccgcagcaatctgagcctgttcagctcccgggtcaagcaagtgcccggccccgac
aaccggctcgaccaacagcccggcatgacggccaacttgggggccgactaccgggtgcgc
agcatcccgctgacggtgggcggcaacgtcaactggaaccccgactacgacacccgccgc
agtgagcagcagtgggcctaccaaggcaccaaacgcgtgctggatgtgtatggccaatgg
cgcttttctgcggccaccgctttgcgcctgacggtgagcaacctcaccccacgcgactac
ctgaccgcgtccacctacagcggcaacggcgtgagcgaaacctcccgcaacaccacgccg
aactggcgcaatgtgcagctgcgtctggaaatgaaaatctga
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