Limnohabitans sp. 63ED37-2: L63ED372_02179
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Entry
L63ED372_02179 CDS
T04121
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
lih
Limnohabitans sp. 63ED37-2
Pathway
lih02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lih00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
L63ED372_02179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_6
Big_13
StcE_b-sandwich
Motif
Other DBs
NCBI-ProteinID:
ALK89382
UniProt:
A0A0P0MA76
LinkDB
All DBs
Position
2281314..2289329
Genome browser
AA seq
2671 aa
AA seq
DB search
MNADWFTADASAGRLVSGSISAPLTAGEVVKVYANGTLIGNAVVNGQQWEITDLNGYNAG
WTYTAKVVDSAGNAGATKTQVVNGDFTEAAPVITSVTDAGSVAVVNNGTTTKTLSSVSGT
GNAGDTIYLYDNSGTNLVGTATVSGSGSWTVSPLAGVYTGSNTFSAKQVDTLGNESVLSN
LWTVTAQGNNQLVNGDFSNGLTGWDTGDVTVNNATTSGQNFYGGPDQAGIFPASYIGGTI
TNRGTGQLNKTATSASGTMTVTGPVDTNYAGNPDGRFQGNVFGWNDQVTSGFTKFLSQKV
SVETGKTYTFTFDAQGWQLADARVYLGETFVNYAFDTVSGSQSWYYLGKITGTFVAATTG
LIDFAFSTENQGDLVLDNLTFSTSATAPNSLVAGGTAPATPGNDTALAYTSGTLSSQAGN
DVITAGTDIQTKLAAGGFINGGAGVDTLKLAAGTDLNLETLTGNQTVKPIQEIEVVTLQG
ASTLTLSANDVLSLGGTNTGTTVGTSTSASPMAPYGFASTTGGTASTSSAGKVQFVVNGT
TTDALVLDPLLQDGFTTNGAQGNTGLSGQWDYMGTASVNSVTYKVYNHSTTNAQVLTQMD
ATIHSNEIAFSSMTKDSGPAGETADWLTADASAGRLVSGTVATPLAAGDVVNVYANGTLI
SNATVNAAGTAWEITDPNGYNANWVYSANIVSGGVTSATAYQPVRTDLTEAAPVITAVTD
SANASIANAGTTTKTLSSVSGTGNAGDTIYLYDNSIGNLVGTAVVGANGTWTVADLVTGA
GANTFSAKQVDALGNPSVLSNLWTVTAAAAESIVNGDFANAAGFTTGLGTSTTGTNYNLT
TSNYAVQNPTSWSTVVTTNATTGTLPYDFGTWQSTYVLHNTSNTSRLAAVTGNALVGSAV
GAGTTWSATVDVVKGQAYEFNFDYSVQYATDANTISSTALAVYIDGVRIDVAGSVSQVGH
FKATYIATETGSINLSTWTDNTRRASPDWHGDYIYDNFSFKPTGVANNNTLVAGTAASAS
SGDDASLVYNDSPTHGLAGNDTITAGTDIQSKLSAGGFIGGGAGVDTLKLAAGTDLNLKT
LTSNQTVKSIQEVEVFQMQGGGTLTLSANDVLSLGATNLAGYSFSTTTGGSASTSSTGKV
QFVVKGTSTDALVLDTLQLDDVTTNGVQGNTGLSGQWDYMGTASVNSVTYKVYNHSTTNA
QVLTQMDATIHSNEIAFSSMTKDSGPAGETADWLTADASAGRLVSGTVATPLAAGDVVNV
YANGTLLGTATVNAAGTAWEITDPNGYNANWVYSANIVSGGVTSATAYQPVRTDLTEAAP
AINSVLDSASVSVSHTGSTANAIATVSGTGAPGDVLFLFDNSSNNMIASTVVSANGTWSV
SGAGVGSGSNTLAAKQVDSLGNQSVLSNLWTFNSQGVNLVPNGDFDTTANFSTDVPFSTN
LPNFSDFVYTVAAGASVWGTPTVTAPALTRSTTSTGVSSGGSTMSWFTDNYSSPRTPMAS
DFNATRAAVFGGDKVMVGSVNGTQGLVTLYKSAAFNVVKGQTYEFSFNYYTDDWSTQTIK
ATIDGIGMTLPSRVGAGETVLNVGTLTATYTATETKSIDIHMTANNIGNGASGGDFTLDD
ISFKLLTPTVDNSLAAGGSSPASIGSDTVTFSGSLVSTLAGDDTITATSTALQTVLAAGG
FIDGGAGVDTLKLAAGTTLDLTAITSNQTVKTIQEVEVLQMQGNSALTLNANDVLSLGGS
NASTMSAYTFASTTGGSASASSTGKVQMVINGTSSDALTLKALAQDGVTTNGAQGNTGLA
GEWTDMGTTVISGTTYRVYNHSTTEAQVLSTVNASLPNNVIAFSSMTKDSGPAGATADWL
TADASAGRLVSGTVATPLAAGDVVKVYANGTLIGNATVNAAGTAWEITDTNGYNTSWSYR
ADVVSSSNVVLSSTTQAVATDFTEAAPVITAVTDSANAAVGATGANASNLNPTSNVLSSV
SGLGNAGDVIYLYDNSRSNLVGSTVVASNGTWKVTGLTGTFTGANSFSAKQIDASGNESV
LSNLWTVNAAGNNLLVNGDLSDGNTGFTSTATAVTAVNFYSTSSVYSVVTSDSLNVVKTL
GNTNTTLSNQATSANYLTWGKTFLTDAAYTANPDNAIKGKYIVGNAANAATLWEQSVSVA
AGQTYTFKFDYALNKFLTTKMNATIDGVNIVFITGANTESGHFVATYVAPTTKTIVLNVK
GDNTAGGSGYGDYWLDNFSFSKAGTGNTLTEAATEPATPGNDTDLPYTSGPLNALAGNDT
ITASSASVQNVLNAGGAINGGAGLDTLKLAASTTLNLVTLTSNQTVKSLQQIESFELQGS
STLTLSANNVLSLGATDAFTGTAGKVQLLIKGTATDNVSLQNLLSDGAGGNSGLAGMWAK
EASTATVGGLTYNVYSHSTTGAQVLISAAIPDSNVSLAASPLALDLNGDGVQTLNIDEGV
LFDLMNTGTAQKVGWLDRNDGWLVMDLNQDGLVNSGAELLGTSTKLADGSLARDGWQALA
QYDLNTDGVIDAQDAAFADLKVWVDADSDGQTDAGELRALYELQIQSIQLNYNDEQTAQN
GNVLDGFSTFTTSDGQTHEMVDAWVQTATASANADSGVVTAENGEVLQLNQLLSTEASAD
TWSQAPTALPASTANDTLQAMLDLHTQHTTM
NT seq
8016 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgctgactggttcaccgcggacgccagcgcaggccgactggtctcgggctcgatc
agtgcaccgctgaccgcaggcgaagtggtcaaggtctacgccaacggcacgctgattggc
aacgcggtggtcaacggccagcagtgggagatcaccgacctgaacggctacaacgctggc
tggacctacaccgccaaggtggtggacagcgcaggcaacgctggcgcgaccaaaacacag
gtggtcaacggtgacttcactgaagcggcgccagtcatcacgagcgtgaccgatgcaggc
tcggtggctgttgtcaacaacggcaccaccaccaaaacactcagcagcgtcagcggcacg
ggcaatgcgggtgacacgatttacctgtacgacaacagtggcaccaatcttgttggaaca
gccacagtgtctggctcagggagctggacagtgtcgccactggccggcgtctacaccggc
agcaacaccttcagcgccaaacaagtggacaccttgggcaatgaaagtgtcttgtccaat
ctgtggacggtgactgcacagggcaacaaccaattggtcaatggtgacttcagcaatggc
ctgaccggttgggacacaggagatgtgaccgtcaacaatgccaccacaagcggccagaac
ttttatggtgggccagaccaggcgggtattttcccggcgtcatatatcgggggcaccatc
accaaccgcgggacaggtcagctcaacaaaaccgccacctcggcatctggaacgatgacg
gtcacaggccccgtggacaccaactacgcgggcaatccagacggccgctttcagggcaac
gtttttggatggaacgatcaagtcacatcaggcttcaccaaattcctgtcgcaaaaagtc
agtgttgaaaccggtaaaacctacacatttaccttcgatgctcaaggttggcaactggcc
gatgcgcgtgtttatctgggtgagaccttcgtcaactatgcgtttgacaccgtctctggt
agccaaagctggtattacttaggcaaaatcacaggcactttcgtagcggccactaccggg
ctgatcgactttgctttctcaactgagaaccaaggcgaccttgtcctggacaacctgacc
ttctcgacttctgcaacagcacccaacagcttggtcgccggtggcacagcacccgccacc
cccggcaacgacacggccttggcctacaccagcggcacactcagttcacaggctggcaac
gacgtcatcacggcgggcaccgacatccagaccaaactggccgcaggcggcttcatcaac
ggcggcgccggtgtggacaccctcaagctggccgctggcaccgacttgaacctggagacc
ttgaccggcaaccaaaccgtcaagcccatccaggaaatcgaagtggtgaccctgcaaggc
gccagcaccttgacgctcagtgccaacgacgtgctgagcctgggcggcaccaacaccggc
accaccgtgggcaccagcacttcggccagccccatggcaccctatggctttgccagcacc
acaggcggcaccgccagcaccagcagcgcgggcaaagtgcagtttgtggtcaatggcacc
accactgacgccttggtgctggaccccttgttgcaagacggcttcaccaccaatggcgct
caaggcaacaccggcttgtcgggtcagtgggactacatgggcacagcaagcgtgaacagc
gtgacctacaaggtctacaaccacagcacgacaaacgcgcaagtcctcacgcagatggat
gccaccatccacagcaatgagattgctttcagcagcatgaccaaagacagtggccctgcg
ggtgagaccgccgactggctcacggcagacgccagcgctggccgcttggtctcgggcacg
gtggccacaccgttggccgcaggcgatgtggtcaatgtctatgccaacggcaccttgatt
agcaacgccacggtgaacgccgcaggcaccgcctgggagatcaccgacccgaacggctac
aacgccaactgggtctacagcgccaacatcgtcagcggcggtgtgaccagcgccacggct
taccagcctgtgcgcaccgacctgacagaagctgcgccagtcatcacagccgtgaccgat
tcggccaacgccagcattgccaacgcaggcaccaccaccaaaacactcagcagcgtcagc
ggcacgggcaacgcgggtgacacgatctacctgtacgacaacagcatcggcaatttggtg
ggcacagccgttgtgggtgccaatggcacctggacggtcgccgacctggtgacgggagcg
ggcgccaacaccttcagcgccaagcaagtggatgcattgggcaacccaagcgtcttgtcc
aatctctggaccgtgacggcagctgcggcggaatccattgtcaacggtgactttgccaat
gcggcaggtttcacgacaggtctgggcacctctacgacaggtaccaactacaacctcacc
acgtccaactacgctgtgcaaaacccgacatcgtggtccactgtggtcacgaccaatgcc
acaacagggactttgccttacgactttggcacatggcaaagcacttatgtgctgcacaac
accagcaacacctccagactggctgctgtgacaggcaatgctttggtcggcagtgcggtc
ggtgcaggcaccacatggtcggccacggtcgatgtggtcaaaggccaagcctatgagttc
aactttgactactcggtgcaatacgccaccgatgccaacaccatctcttcgacggctttg
gcggtgtacatcgatggcgttcgtatcgatgtggccggcagtgtttcgcaagtggggcat
ttcaaggccacctacattgccacagaaacaggttcaatcaatctgagcacctggacggac
aacacgcgtcgagccagcccagactggcacggtgattacatctacgacaacttcagcttc
aagcccacaggcgtggccaacaacaacaccctcgtggcgggcactgctgcgtctgccagc
tcgggggacgatgcctccttggtctacaacgacagccccacccatggtttggctggcaac
gacaccatcaccgcaggcaccgatatccagtccaaactgtccgcgggcggcttcatcggt
ggcggcgcaggcgtggacacgctcaagctggccgctggcaccgacttgaacctgaagacc
ttgaccagcaaccaaaccgtcaagtcgatccaggaagtggaagttttccagatgcaaggc
ggcggcaccctgaccctgtcggccaacgatgtcctgtctttgggcgcgaccaatctggcg
ggatacagcttcagcaccaccaccggtggctctgcaagcaccagcagcacgggcaaagtg
cagtttgtggtcaaaggcaccagcaccgatgcattggtactcgataccttgcagctggac
gacgtcaccaccaacggcgtacaaggcaacaccggcttgtcgggtcagtgggactacatg
ggcacagcaagcgtgaacagcgtgacctacaaggtctacaaccacagcacgacaaacgcg
caagtcctcacgcagatggatgccaccatccacagcaatgagattgctttcagcagcatg
accaaagacagtggcccggcgggtgagaccgccgactggctcacggcagacgccagcgct
ggccgcttggtctcgggcacggtggccacaccgttggccgcaggcgatgtggtcaatgtc
tatgccaacggcactttgctgggcaccgccacggtgaacgccgcaggcaccgcctgggag
atcaccgacccgaacggctacaacgccaactgggtctacagcgccaacatcgtcagcggc
ggtgtgaccagcgccacagcctaccagcctgtgcgcaccgacctgaccgaggccgcgcca
gcgatcaacagcgtcttggattcggccagtgtgagcgtctctcatactgggtcaactgct
aatgcaattgcgactgtgagtggtaccggtgcaccgggcgatgtgttgttcctgtttgac
aacagcagcaacaacatgattgcaagtaccgtggtgtctgcaaatggcacatggtctgtc
agtggcgcaggcgtaggttcggggtcaaacacattggcggccaagcaggtcgactctttg
ggaaatcaaagcgttctatcgaatttgtggactttcaattcccaaggtgtcaaccttgtt
ccaaacggggacttcgacaccactgcgaatttcagtaccgatgtgccattcagtacgaat
ctacccaatttctcagactttgtttataccgtcgcagcgggtgcatcagtctggggaaca
cctacggttaccgcccctgcattgaccagatcaacgaccagcacaggcgtgtcctcaggt
ggcagcacgatgtcatggtttacagacaactacagtagcccgcgcacacctatggccagc
gatttcaatgccacccgtgcggctgtgtttggcggagacaaagtgatggtgggctctgta
aatggcacccaaggcttggtcaccttgtataaatctgctgctttcaatgtggtcaagggg
caaacctacgagttcagcttcaattactacacggacgactggagcacgcagaccatcaaa
gccacaattgatggtatcggcatgacacttccatctcgcgttggtgcaggtgaaacggta
ttgaatgtgggtaccttgactgccacatacacggctactgaaaccaagtcaatcgacatt
cacatgactgccaacaatattggcaatggcgcatccggaggcgacttcactttggatgac
atcagctttaagttgttgacgccaacggtagacaacagtctggcagctggtggatcgtcc
cctgcatccattggcagcgatacagtgaccttcagtggcagcttggtatcaacattagcc
ggtgacgacaccatcaccgcgaccagcacggccttgcaaacagtactggccgcaggcgga
ttcatcgacggcggcgcgggcgtggacacgctcaaactggcagcaggcaccaccttggac
ctgaccgccatcaccagcaaccagaccgtcaagaccatccaagaagtggaagtgctgcag
atgcagggcaacagcgccctgacactgaacgccaacgacgtgctgagcttgggcggcagc
aatgccagcaccatgagcgcctacacctttgcaagcaccaccggcggcagcgccagtgcc
agcagcaccggcaaggtgcaaatggtcatcaacggcaccagcagcgacgcactcacgctc
aaggcgctggcgcaagacggcgtgaccaccaacggcgcacagggcaacaccggtttggcc
ggtgagtggaccgacatgggcaccaccgtgatcagcggcaccacctaccgtgtgtacaac
cacagcaccaccgaggcacaggtgctcagcaccgtcaacgccagcctgcccaacaacgtg
attgccttcagcagcatgaccaaggacagtggccctgcgggtgctacagccgactggctc
acggcagacgccagcgctggccgcttggtctcgggcacggtggccacaccgttggccgca
ggcgatgtggtcaaggtctatgccaacggcaccttgattggcaacgcgacggtgaacgcc
gcaggcacggcttgggaaatcaccgacaccaacggctacaacaccagctggtcctaccgc
gccgatgtggtgagcagcagcaatgtggtgctgagctcaacaacccaagcggtggccacc
gacttcaccgaagcagcccccgtgatcacggctgtgaccgactcggccaatgcggccgtt
ggtgccaccggtgccaacgcaagcaatttgaatcccacaagcaatgtcttgagcagtgtg
agtggtttgggcaatgctggcgatgtgatctacctgtacgacaacagccgctccaatttg
gtgggttccaccgttgtggccagcaatggcacctggaaggtgacgggcctgaccggcacc
ttcaccggtgccaacagcttcagcgccaagcaaatcgatgcttctggcaatgaaagcgtg
ttgtcgaatttgtggacagtcaatgcggcgggcaacaatttgctggtcaacggtgacctg
agtgatggcaatacgggcttcacaagcaccgctaccgctgtgacggcagttaatttttat
tcgacgagcagtgtttacagcgtggtcacttcggatagcctgaatgtggttaagactttg
ggcaataccaacaccacactgagcaaccaggcgacttcagcaaattatctgacgtggggt
aaaacctttttaaccgatgctgcttacactgccaacccggataacgcgatcaaaggcaaa
tacattgtgggtaatgctgcaaatgcggccaccctgtgggagcagtcggtcagtgtggcc
gcaggtcagacctataccttcaagtttgactatgcgctcaataagtttttgaccaccaaa
atgaatgcaaccatcgatggcgtcaacattgttttcatcaccggcgcgaacactgagtct
ggtcattttgtggccacttatgtggccccaacaaccaaaaccattgttttgaatgtgaag
ggtgacaacactgcgggcggcagcggatatggtgattactggctggataacttcagcttt
tccaaagccggtacgggcaatacattgactgaggcagcgacggaacccgccacccctggc
aacgacaccgacttgccttacaccagcggcccactcaatgccttggcgggcaatgacacc
atcaccgccagcagtgcatcggtgcaaaacgtgctcaatgcaggcggtgccatcaacggc
ggcgcgggcttggacaccctcaagctggccgcaagcaccacgctcaatctggtcacgctc
accagcaaccagaccgtcaagtcgctccaacagatcgagtctttcgaactgcagggttcc
tcaacgctcaccttgtcagccaacaatgtgctgagcctgggcgccaccgatgccttcacg
ggcaccgccggcaaggtgcagttgctcatcaagggcacagccaccgacaacgtgtcgctg
cagaacttgctcagcgacggcgcaggaggcaacagtggcctggccggcatgtgggccaaa
gaagccagcacagcgaccgtgggcgggctaacctacaacgtctacagccacagcaccacg
ggtgcgcaggtgctgatctcagccgctattcccgactccaacgtcagtctggccgcatcg
cctttggcgctggacctcaacggtgacggcgtgcagaccctgaacatcgatgagggcgtg
ttgttcgatttgatgaacaccggcaccgcgcaaaaagtgggctggcttgaccgcaacgat
ggctggttggtcatggacttgaaccaagacggcttggtcaacagcggcgccgagctgctg
ggcaccagcaccaagctggccgatggcagcttggcccgcgacggctggcaggccttggcg
cagtacgacctgaacaccgacggtgtgatcgatgcccaagacgcggcatttgccgatctg
aaggtctgggtggatgccgacagcgatggtcagaccgatgcgggcgaattgcgtgcgttg
tacgagttgcaaattcagagcatccagctcaactacaacgacgagcaaaccgcgcaaaac
ggcaacgtgctcgacggcttctccactttcaccacaagcgacggccaaacgcatgagatg
gtggacgcgtgggtacagacggctactgcgtctgccaacgcggacagtggtgtggtgacg
gcggaaaatggcgaggtgttgcagctgaaccagctgctgagcacagaggccagtgccgac
acctggagccaggcccccacggccttgcccgcaagcactgctaacgacaccctgcaagcg
atgctggatctgcacacccagcacacgaccatgtga
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integrated database retrieval system