Limnohabitans sp. 63ED37-2: L63ED372_02195
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Entry
L63ED372_02195 CDS
T04121
Symbol
phrA
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
lih
Limnohabitans sp. 63ED37-2
Brite
KEGG Orthology (KO) [BR:
lih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lih03400
]
L63ED372_02195 (phrA)
Enzymes [BR:
lih01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
L63ED372_02195 (phrA)
DNA repair and recombination proteins [BR:
lih03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
L63ED372_02195 (phrA)
Prokaryotic type
L63ED372_02195 (phrA)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Usp
TRPM_tetra
Motif
Other DBs
NCBI-ProteinID:
ALK89398
UniProt:
A0A0P0MA90
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All DBs
Position
2337570..2339045
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AA seq
491 aa
AA seq
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METPFSCGLVWLRRDLRVSDHAALHQALKHCQRVHVAFVFDTEILDALPRADRRVEFIRE
SLVEVDARLRELAGHPQAGLIVRHGVAKDKIVKLAQHLQAQVVFANHDDEPLALARDIQV
RGHLADHGIVLHTYKDHVVFERNEVLTQMAKPFSVFTPYKNAWLKKVTPEDLRAFEVAPL
ATRLAPRPDDLAQPVPSLADMGFETTNLQALKIPTGESGAQALLQDFLTRIDQYEDTRNF
PAVKGPSYLSVHLRFGTVSIRQLAREAHPRMLAGSVGASVWLSELIWRDFYVQVLHNFAH
VGRGQSFKPEYDAIEWEHGPHAHKLFNAWCEARTGYPLVDAAMRQINQTGYMHNRLRMVV
ASFLVKDLGIDWRWGEKYFATHLNDFDLSANNGGWQWASSSGCDAQPYFRIFNPISQSEK
FDPEGKFIRRYVPELADLPTAALHAPWLAKPMELQAAGVVIGKTYPAPIVDHAEAREITL
ARYAVVKKKTD
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggaaacccctttttcttgcggcctggtctggctgcggcgcgatctgcgcgtgagtgac
catgcggccctgcaccaggccctgaagcactgccagcgtgtgcatgtggcgtttgtgttc
gacaccgaaatcctggacgctctgccccgtgccgatcgccgggtcgagttcatccgcgag
tcgctggtcgaggtggatgcccgcttgcgcgagttagcaggccacccccaggctggcctg
atcgttcgccacggcgtggccaaggacaaaatcgtcaaactggcccagcacctgcaggcc
caggtggtgtttgccaaccacgacgacgagcccctggcgctggcccgcgacatccaggtg
cgcggccacttggccgaccatggcatcgtgctgcacacctacaaggaccatgtggtgttt
gagcgcaacgaggtgctgacgcagatggccaagcccttcagcgtgttcacgccctacaaa
aatgcctggttgaagaaagtcacacccgaagacctgcgggctttcgaagtggcacctctg
gccactcgcctggccccgcgccccgacgatctggcgcagccagtgcccagcctggccgac
atgggctttgagaccaccaacctgcaagccctgaaaatccccacgggcgagtcgggcgct
caggctctgctgcaagactttttgacccgcattgaccagtacgaagacacacgcaacttc
cccgctgtcaaaggcccaagctatttgagtgtgcatttgcgctttggcacggtgtcgatt
cgccagctggcccgcgaggcgcacccccgcatgttggcgggcagcgtgggggccagcgtg
tggctgtcagagctgatttggcgcgacttttatgtgcaggtgctgcacaactttgcccat
gtgggccgaggccaaagcttcaaacccgaatacgacgcgattgaatgggagcacggccca
cacgcccacaaactgttcaacgcctggtgcgaagcccgcaccggttacccgctggtggac
gcggccatgcgccaaatcaaccagacgggctacatgcacaaccgcctgcgcatggtggtg
gcgagctttttggtgaaagatttgggcatcgactggcgctggggcgagaagtacttcgcc
acccacctgaacgacttcgatttatcggccaacaacggtggctggcagtgggccagctcg
agcgggtgtgatgcgcagccctacttccgcatcttcaacccgatcagccaaagcgaaaag
ttcgaccccgagggcaaattcatccgccgctatgtgccggaactggccgatttgccaacg
gccgcattgcacgcgccgtggctggccaaacccatggagttgcaagcggcgggggtggtg
atcggcaagacctaccctgcccccatcgtggaccacgccgaagcccgagaaataactttg
gcgcggtacgccgtggtcaagaaaaaaacagactga
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