Limnohabitans sp. 63ED37-2: L63ED372_02266
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Entry
L63ED372_02266 CDS
T04121
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
lih
Limnohabitans sp. 63ED37-2
Pathway
lih03030
DNA replication
lih03430
Mismatch repair
lih03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L63ED372_02266 (holA)
03430 Mismatch repair
L63ED372_02266 (holA)
03440 Homologous recombination
L63ED372_02266 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lih03032
]
L63ED372_02266 (holA)
03400 DNA repair and recombination proteins [BR:
lih03400
]
L63ED372_02266 (holA)
Enzymes [BR:
lih01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L63ED372_02266 (holA)
DNA replication proteins [BR:
lih03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
L63ED372_02266 (holA)
DNA repair and recombination proteins [BR:
lih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
L63ED372_02266 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
ALK89469
UniProt:
A0A0P0MAE6
LinkDB
All DBs
Position
complement(2417395..2418447)
Genome browser
AA seq
350 aa
AA seq
DB search
MQLALPQLGAHLQKGLRSLYILHGDEPLMQQEAADAIRASARAQGYTERSVHTVSGAHFD
WSEVLAAGGSLSLFADKQIVEVRIPSGKPGKEGSAAIQQLVASAQGNDSTLTLVLLPRLD
AATRKGAWFGALENGGVSIQIDPVDRNALPQWIAQRLQTQGQSVAAGEEGQRTLQFFADR
VEGNLLAAHQEIQKLGLLYPAGELSQAQVEAAVVNVARYDVFKLSELVLSGQVARVQRML
DGLQAEGEAAVLVHYTLAEDIRAMKRVKDAMTAGKPLPMALREQRVWGPRERLFERVLPR
MSEARLNGLLQAAHQVDGIVKGLKVPDWPTDPWQALQRLAVRFSRFCNVR
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgcaactggccctgccccagctcggagcgcacctgcaaaaaggcctgcgcagcctgtac
atcctgcacggcgacgaacccctgatgcaacaagaggccgccgacgccatccgcgccagc
gcccgcgctcagggctacaccgaacgcagtgtgcacaccgtctccggcgcccatttcgac
tggagtgaggtgctggccgcaggcggctcgctcagcctttttgccgacaagcagatcgtg
gaggttcgcatcccttcgggcaagcccggcaaggaaggcagcgccgccatccagcaattg
gtggcctctgctcaaggcaacgacagcaccttgaccttggtcttgctgccgcgcctggat
gcggccacccgcaaaggggcttggtttggagcgctcgaaaacggtggcgtgtccatccag
atcgatccggttgatcgaaacgccttgccccagtggattgcccagcgactgcaaacgcaa
ggccaaagcgtggccgcaggcgaagaggggcagcgcaccctgcagttttttgccgaccga
gtggaaggcaatttgctggccgcacaccaggaaatccagaagctcggcttgctctacccc
gcaggcgaactcagccaagcgcaggtcgaggcggccgtggtcaatgtggcccgctacgac
gtgttcaagttgtccgagttggtcttgtcgggccaggtggcccgggtccagcgcatgctc
gatggcctgcaggccgagggcgaggcggctgtgctggtgcactacaccctcgcagaagac
atccgggccatgaagcgcgtgaaagacgccatgaccgctggcaagcccttgcccatggcg
ctgcgcgagcagcgcgtttggggtccgcgtgagcgcttgtttgagcgcgtgctgccccgc
atgagcgaagcccgcctgaacggcctgctgcaagcggctcaccaagtggacggcattgtc
aaaggcctcaaagtgcccgactggcccaccgacccttggcaggccctgcagcgcctggct
gtgcgtttctcgcgtttttgcaacgtgcgttga
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