Limnohabitans sp. 63ED37-2: L63ED372_02320
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Entry
L63ED372_02320 CDS
T04121
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
lih
Limnohabitans sp. 63ED37-2
Pathway
lih00470
D-Amino acid metabolism
lih00550
Peptidoglycan biosynthesis
lih01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lih00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
L63ED372_02320 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
L63ED372_02320 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lih01011
]
L63ED372_02320 (murD)
Enzymes [BR:
lih01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
L63ED372_02320 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
lih01011
]
Precursor biosynthesis
Amino acid ligase
L63ED372_02320 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
DAO
2-Hacid_dh_C
AlaDh_PNT_C
NAD_binding_7
3HCDH_N
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
ALK89523
UniProt:
A0A0P0MAJ5
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All DBs
Position
complement(2476074..2477831)
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AA seq
585 aa
AA seq
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MQLQGQHVLILGLGASGLAMARWCALAGADVTVADTRDAPPQLATLQAEWPAVRFISGPF
AASLVEGTSVRAVFRSPGLAPEVVAPVVDAARSMGLWQGGELSLFAAGLGDLKTRFGYAP
QVLAITGTNGKTTVTSLTGQLVARAGKTVKVAGNIGPTLLDTLTEAIAQAQLQVEQEAAE
RAAAELENPDLVSEQSSATTVTETFTHAQDEPASEAADTTDTDEALDSLDEEVAAELPLP
VAPAVHDPMAQALPQVWVLELSSFQLDSCEGFEPTAATVLNISQDHLDWHGSMAAYAAAK
ARIFGAQALMVLNREDAQVMAMRPEPVRVKLQKPVERAAVLFGGDMPQRPGDFGIEVTHG
MTWLVRALEADETRRRRKDEAEELHIQRLMPADALRIRGRHNAVNALAALALASSAGCAL
GPMLYGLREYRGEPHRVEPVAIIQEVEFFDDSKGTNVGATVAALQGLGADRRVVVILGGD
GKGQDFSPLADPVQRFARGVVLIGRDAHVIREALQGTDVPLHDAADMQAAVAQAAAIARS
GDAVLMSPACASFDMFDNYGHRAEVFVQAVASLAEAAGVAMEGGL
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgcagctccaaggtcaacacgttctgattctcggtttgggtgcttcgggcctggcaatg
gcccgttggtgcgccctggccggagcggacgtgaccgtggccgatacccgtgatgcgccg
ccgcagttggccactttgcaggccgagtggcctgccgtgcgctttatctccggccccttt
gcggccagcctggttgaaggcacatcggtgcgtgcggtgttccgcagcccgggcctggcc
cctgaggtggtggccccggtggtagacgctgcccgcagcatgggactttggcaaggcggc
gagctgagcttgttcgcagcgggattgggagatttgaagacacgctttggctacgccccg
caggtgctggccatcaccggcaccaatggcaagaccacggtcacgtccctcaccggacag
ctggtagcgcgtgcgggcaaaaccgtgaaagtggcgggcaacattggccccacactgctg
gacaccttgaccgaagccatcgcgcaagcgcaattgcaggtcgaacaagaagccgctgaa
cgcgccgcggctgagcttgaaaacccagatctggtcagtgagcagtcttcggccacgacg
gttacagaaacgttcacccatgctcaggatgagcccgcaagcgaggccgccgataccacc
gataccgacgaggcgctggacagcttggatgaagaggtcgccgctgaactgccgctgccc
gttgcgcctgctgttcacgatcccatggctcaggctttgccacaggtgtgggtgctggaa
ttgtccagcttccagctcgacagctgcgaaggctttgagccgaccgctgccaccgtgctg
aacatctcgcaagaccacctcgattggcacggcagcatggccgcctatgctgcagccaaa
gcccgcatttttggtgcacaggccctgatggtgctcaaccgcgaagacgctcaagtcatg
gccatgcggcccgagcccgtgcgtgtgaagttgcaaaagcctgttgagcgcgctgctgtg
ctgtttggtggcgacatgccccagcgaccaggcgactttggtatcgaagtcacccacggc
atgacctggctggtccgtgccctggaggccgatgaaacacgtcgccgccgcaaagatgaa
gccgaagagctgcacatccagcgcctgatgcccgccgacgccttgcggattcgtggacgc
cacaacgcggtcaatgcgctcgctgctttggcgctggccagcagcgcaggttgtgcgctg
ggccccatgctgtatggcctgcgcgaataccgcggcgagccgcaccgtgtcgagccggtg
gccatcatccaagaggttgaattttttgatgacagcaagggcaccaacgtcggcgcgacg
gtcgcagccttgcaaggcctgggcgcagaccgccgtgtggtggtcattttgggcggtgat
ggcaagggccaggacttctcgcctttggccgatcccgttcagcgttttgcccggggtgtg
gtcttgatcggtcgcgacgcccacgtgatccgcgaagcgctgcaaggcaccgacgtgccg
ctgcacgatgccgcagacatgcaggccgccgtggcacaagctgcggccatcgcccgcagt
ggcgatgcggtcttgatgtcgcccgcttgcgcgagctttgacatgtttgacaactacggc
caccgcgccgaggtgtttgtgcaagccgtggcgagcttggccgaggcagcgggtgtggcc
atggagggcgggctgtga
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