Limnohabitans sp. 63ED37-2: L63ED372_02347
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Entry
L63ED372_02347 CDS
T04121
Symbol
mutM
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
lih
Limnohabitans sp. 63ED37-2
Pathway
lih03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
L63ED372_02347 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lih03400
]
L63ED372_02347 (mutM)
Enzymes [BR:
lih01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
L63ED372_02347 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
L63ED372_02347 (mutM)
DNA repair and recombination proteins [BR:
lih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
L63ED372_02347 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
ALK89550
UniProt:
A0A0P0LKH8
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All DBs
Position
complement(2505855..2506703)
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AA seq
282 aa
AA seq
DB search
MQPKPFFAPEPMPELPEVEVTRRSFADRIASAQILALHMGKPLRWPLGVPAQSLVGRQIW
GVRRRGKYLLLDLDQGLLLVHLGMSGSLNFAPTQPESGPHDHMDLVTDRGVLRLHDPRRF
GAVVWAPGEDSPQAQKLLGRLGVEPLSAQFDAAAFAQALKKRQSPIKQVLLAGDEVVGVG
NIYASEALFMAGIRPTSKASRLSKPRVARLHAAIVQVLTRAVEQGGSSLRDFVSAEGRTG
YFQLEAAVYGRAGEPCRVCATPIQSMLQGQRTTFYCPTCQKS
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgcagcccaagccctttttcgccccagagcccatgcccgaactccccgaagttgaagtc
acccgccgcagttttgccgaccgcattgcctcggcccagatcctggccttgcacatgggc
aagcctctgcgctggcctttgggcgtgcctgcccaaagcctggtggggcggcaaatctgg
ggcgtgcgcaggcgcggcaaatacctgttgctcgatctggaccaggggcttttgcttgtc
cacttgggcatgtcgggcagcctgaactttgcccccacacagcccgaatctggcccacac
gaccacatggacttggtgaccgaccggggggtgttgcgcctgcacgacccgcgccgtttt
ggcgcggtggtctgggcgccgggtgaggattcgccccaagcgcaaaagctgctggggcgt
ttgggtgtggagcctttgagcgcccagttcgatgcggcggcttttgcccaagccctcaaa
aaacgccagtcgcccatcaaacaggtgctgctggcgggcgacgaggtggtgggcgtgggc
aatatttacgcttccgaagccttgttcatggcgggcattcgtcccacctccaaggcctcg
cgtttgtccaaaccccgtgtggcccggctgcacgcggccatcgtgcaggtgctgacccgt
gcggtggagcagggtggcagctcgctcagggattttgtcagcgccgagggccgcaccggt
tactttcaattggaagcggcggtgtacggccgcgcgggcgagccttgccgggtgtgcgcc
acccccatccaatcgatgctgcaaggccagcgcaccaccttttactgccccacatgtcaa
aagtcataa
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