Limnohabitans sp. 63ED37-2: L63ED372_02476
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Entry
L63ED372_02476 CDS
T04121
Symbol
ffh
Name
(GenBank) Signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
lih
Limnohabitans sp. 63ED37-2
Pathway
lih02024
Quorum sensing
lih03060
Protein export
lih03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
lih00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
L63ED372_02476 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
L63ED372_02476 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
L63ED372_02476 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
lih02044
]
L63ED372_02476 (ffh)
Enzymes [BR:
lih01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
L63ED372_02476 (ffh)
Secretion system [BR:
lih02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
L63ED372_02476 (ffh)
Eukaryotic Sec-SRP protein
L63ED372_02476 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
CbiA
APS_kinase
AAA_16
AAA_22
ABC_tran
AAA_33
AAA_30
AAA_31
AAA_17
cobW
ResIII
Helicase_RecD
AAA_14
Thymidylate_kin
AAA_18
AAA_24
AAA_19
nSTAND3
TsaE
AAA_28
YqeC
Baculo_PEP_C
ArsA_ATPase
KTI12
Rad17
Motif
Other DBs
NCBI-ProteinID:
ALK89676
UniProt:
A0A0P0LKW2
LinkDB
All DBs
Position
complement(2629302..2630687)
Genome browser
AA seq
461 aa
AA seq
DB search
MASALTDKLSRLVKTLSGQARITESNVADMLREVRMALLEADVALPVVRDFIARVKDKAL
GQEVMGSLKPGQALVGVVNRELAATMGEGVSDINLAAQPPAVILMAGLQGAGKTTTTAKL
AKHLIEKRKKKVLTVSGDVYRPAAIEQLKTVTAQAGAEWFPSSPDQKPIDIARAAIDYAR
KHFFDVLLVDTAGRLAIDEALMAEIKALHVELKPVETLFVVDAMQGQDAANTAKAFSDAL
PLTGIVLTKLDGDSRGGAALSVRQITGVPIKFAGTSEKIDGLEVFDAERHAGRVLGMGDI
VALVEQVTAGVDMEAAQKLASKVKSGGSFDLNDFLSQIQQMKQMGGLSSLMDKLPSQLTA
KAGSMDMDKVEKDIGRKQGIIHSMTPQERKKPELIKATRKRRIAAGAGVQVQDVNRMLKE
FEQMQDMMKKMSGGGMMKMMKRMGAMKGMMGGGGGFPGMPR
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgccctgaccgacaaactctcacgcctcgtcaagaccctcagcggacaggcc
cgcatcaccgaatcgaacgtggccgacatgctgcgcgaggtgcgcatggccttgctcgaa
gccgatgtggctttgccggtggtgcgcgatttcattgcccgcgtgaaagacaaagccttg
ggccaagaggtcatgggctcgctcaagcccggccaggccttggtcggcgtggtcaaccgc
gagttggctgccaccatgggcgagggggtgtctgacatcaacctggccgcgcagccgccc
gccgtgattttgatggcgggtttgcaaggtgcgggtaaaaccaccaccaccgccaagctg
gccaaacacctgatcgaaaagcgcaaaaagaaagtgctcacagtctcgggcgacgtgtac
cgccccgctgccattgaacagctcaagacagtgaccgcacaggccggggccgagtggttc
cccagctcgcccgaccaaaagccgatcgacatcgcccgcgccgctatcgactacgcccgc
aagcacttttttgatgtgctcttggtggacacggccggtcgcctggcgattgacgaagct
ctgatggccgagatcaaggccttgcacgtcgagctcaaacccgtcgaaaccctgttcgtg
gtcgacgccatgcagggccaagacgcggccaacaccgccaaggctttcagcgatgcattg
cctttgacgggtattgtgctcaccaaattggacggcgattcacgcggcggtgcggctttg
tcggtgcgccagatcacgggtgtgcccatcaagtttgcgggtaccagcgagaagatcgac
ggcctggaagtgtttgacgccgagcgccatgcgggccgggtgctgggcatgggcgacatc
gtggccttggttgagcaggtcaccgccggtgtggacatggaggcagcacaaaagctggcg
tccaaggtcaaaagcggtggcagttttgacttgaacgactttttgtcccagatccagcag
atgaaacaaatgggtggtttgtcgagtctgatggacaagctgccgtcgcaactgaccgcc
aaggccggttccatggacatggacaaggtcgagaaagacattggtcgcaagcaaggcatc
atccacagcatgacgccgcaagagcggaaaaaacccgagctcatcaaagccacacgcaag
cgccgcattgctgcaggtgcaggcgttcaggtgcaggacgtgaaccgcatgctcaaggag
tttgagcagatgcaggacatgatgaaaaaaatgtccggcggcggcatgatgaaaatgatg
aaacgcatgggcgccatgaaaggcatgatgggcggcggcgggggcttccccggcatgccg
cgctga
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