Limnohabitans sp. 63ED37-2: L63ED372_02928
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Entry
L63ED372_02928 CDS
T04121
Name
(GenBank) Soluble hydrogenase 42 kDa subunit
KO
K00830
alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:
2.6.1.44
2.6.1.45
2.6.1.51
]
Organism
lih
Limnohabitans sp. 63ED37-2
Pathway
lih00250
Alanine, aspartate and glutamate metabolism
lih00260
Glycine, serine and threonine metabolism
lih00630
Glyoxylate and dicarboxylate metabolism
lih00680
Methane metabolism
lih01100
Metabolic pathways
lih01110
Biosynthesis of secondary metabolites
lih01120
Microbial metabolism in diverse environments
lih01200
Carbon metabolism
lih01210
2-Oxocarboxylic acid metabolism
lih04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
lih00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
L63ED372_02928
09102 Energy metabolism
00680 Methane metabolism
L63ED372_02928
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
L63ED372_02928
00260 Glycine, serine and threonine metabolism
L63ED372_02928
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
L63ED372_02928
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lih01007
]
L63ED372_02928
Enzymes [BR:
lih01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.44 alanine---glyoxylate transaminase
L63ED372_02928
2.6.1.45 serine---glyoxylate transaminase
L63ED372_02928
2.6.1.51 serine---pyruvate transaminase
L63ED372_02928
Amino acid related enzymes [BR:
lih01007
]
Aminotransferase (transaminase)
Class V
L63ED372_02928
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Beta_elim_lyase
LSDAT_prok
Motif
Other DBs
NCBI-ProteinID:
ALK90126
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Position
complement(3056107..3057330)
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AA seq
407 aa
AA seq
DB search
MNRFSPSTPRIPGIRFVHSPGPTHVPDEVMHAMQRPMTDLSDPRVAAMIAECESGMKRLL
HSPNSDVFLFASNGHGMWESVAANLASPQHTLLLAGSGHFSDQWALQIEGLGVALQRTPH
QEGHPFDVAAIEQALRDDKDHRISAVLVVHTETSSGVTSDLAAVRRAIDAAAHPALYVVD
AVASLAASPFHMDALGVDVALGSSQKGLMMPPGLGFVAVNAQAMAWSAQHADPRFYWDWQ
RRQTGNQSAKFCGTPPLAHIAGLETAIALLEAEGLPQVWARHQRLAGAVHAAVERWAVPG
ALRFHARVPETRSASVTAIEVVPGIDPEALRTVARERFQVAMAGGLGPLAGRVFRIGHLG
DMNEPMILGALAGIEAAMTVQKIPFGTDGVAAAVAFLAANSSAQSTR
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcttttctccgtcgacaccccgcatccccggcatccggtttgtgcattcgccc
ggcccgacccatgtgcccgacgaggtcatgcacgccatgcagcgcccgatgaccgatttg
tccgacccccgtgtggcggccatgattgccgaatgcgaaagcggcatgaagcgcttgttg
cacagcccaaattccgatgtgtttttgtttgccagcaacgggcatggcatgtgggagtcg
gtggccgccaacttggcttcaccacaacacaccttgctgttggcgggctcgggccatttc
tcggaccagtgggcgctccagatcgagggcttgggcgtggccttgcagcgcaccccccat
caagaggggcatccgtttgatgtggctgccatcgagcaagccctgcgcgatgacaaagac
caccgcatcagtgcagtgctggtggtgcacaccgaaacctccagtggcgtgaccagtgac
ctggccgcggtgcgccgcgccatcgatgcggcggcgcatccggcgctgtacgtggtggat
gcggtggcctcgctggctgccagtccttttcacatggacgccttgggcgtggacgtggcc
ttgggcagttcgcaaaagggcttgatgatgccgcccggcctgggctttgtggccgtgaac
gcccaagccatggcctggtcggcccagcatgccgacccgcgcttttattgggactggcaa
cgccgccaaaccggcaaccagtcggccaagttttgtggcactccgccgctggcccacatc
gctggcttggagaccgccatcgccttgctcgaagccgagggcctgccccaggtgtgggcg
cggcaccagcgtttggcgggtgcggtgcacgcagcggtggagcgctgggccgtgccaggc
gccctgcgttttcatgcccgcgtgcccgagacacgctcggcctcggtcacggccattgag
gtggtgcccggcatcgaccccgaagccttgcgcaccgtggcccgcgagcgctttcaggtg
gccatggcggggggtttggggccattggctgggcgggtgttccgcatcggccacttgggc
gacatgaacgagcccatgatcttgggggcgttggctggcatcgaagcggccatgacggtg
caaaagattccttttggcaccgacggcgtggcggcggcggtcgcttttctggctgctaac
tcgtccgctcagagcacccggtaa
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