Limnohabitans sp. 63ED37-2: L63ED372_03108
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Entry
L63ED372_03108 CDS
T04121
Symbol
ung
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lih
Limnohabitans sp. 63ED37-2
Pathway
lih03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
L63ED372_03108 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lih03400
]
L63ED372_03108 (ung)
Enzymes [BR:
lih01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
L63ED372_03108 (ung)
DNA repair and recombination proteins [BR:
lih03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
L63ED372_03108 (ung)
Prokaryotic type
L63ED372_03108 (ung)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ALK90305
LinkDB
All DBs
Position
3244432..3245184
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AA seq
250 aa
AA seq
DB search
MTGQQSLGFEEAPAVPDQALSWPADLQGLDAGWRPLVDAFLSSETGLALSKRLTDALQAG
HTIYPPEPFRALSLTPLSEVRVVILGQDPYHGPGQAEGLAFSVAPGVRLPPSLRNIFKEL
QKSLGVSIAADGSLVRWAKQGVLLLNTCFTVEAGQAASHARWGWEVLSDQLIQVVAQSSK
PVVFMLWGAQAQAKKALIEAAGRSGRHLVLMANHPSPLSALRAPVPFMGCGHFSQANIFL
AQSGEKTIVW
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgacgggtcagcaaagcttggggtttgaagaggcgcctgccgtgcctgatcaagccctg
agttggccagcagatcttcaaggcctggacgcgggttggcgacccttggtcgacgccttt
ctgagttccgagacggggctggccttgtccaagcgattgaccgatgccctgcaagctggg
cacaccatttacccacccgagccctttcgggcgctgagcctgacccctttgagcgaggtg
cgggtggtgattctggggcaagacccgtaccacgggccgggccaggcagaaggcctggcc
ttctcggtggcacccggtgttcgcctgccccccagtttgcgcaacatcttcaaggaactc
cagaaaagcctgggtgtctctatcgctgcagatgggtctttggtgcgctgggccaaacaa
ggggttttgctgctcaacacctgtttcacggtggaagccggacaagcggccagccatgcc
cgttggggctgggaggtgttgagcgatcagctcattcaagtggtggcccaaagttcaaaa
ccggtggtgtttatgttgtggggcgcccaagcgcaggctaaaaaagccttgattgaagcg
gctgggcgttcggggcgacatttggtgttgatggccaaccacccctcgccgttgtccgcc
ctgcgagcccctgtcccgttcatgggctgtggtcacttttcgcaagccaatatcttttta
gcgcaatccggcgaaaaaaccatcgtctggtga
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