Listeria ivanovii subsp. ivanovii WSLC 3010: JL52_00280
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Entry
JL52_00280 CDS
T03400
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
lii
Listeria ivanovii subsp. ivanovii WSLC 3010
Brite
KEGG Orthology (KO) [BR:
lii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lii03032
]
JL52_00280 (gyrB)
03400 DNA repair and recombination proteins [BR:
lii03400
]
JL52_00280 (gyrB)
Enzymes [BR:
lii01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
JL52_00280 (gyrB)
DNA replication proteins [BR:
lii03032
]
Prokaryotic type
DNA Topoisomerases
JL52_00280 (gyrB)
DNA repair and recombination proteins [BR:
lii03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JL52_00280 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
TOPRIM_C
GyrB_hook
Motif
Other DBs
NCBI-ProteinID:
AIS66653
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Position
61368..63284
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AA seq
638 aa
AA seq
DB search
MHESASDYNEDQIQVLEGLEAVRKRPGMYIGSTSQRGLHHLVWEIVDNAIDEALAGFCTE
IEITIEADNSITVRDNGRGIPTGINEKIGRPTVEVIFTVLHAGGKFGGGGYKVSGGLHGV
GASVVNALSTSLEVYVHREGQKYYQRFERGDVVMDMEEQGETDYRGTIVHFTPDPQIFTE
TTEFDFDTLRTRTRELAFLNRGLTISIEDKREEHKVRKDFHYEGGIRSYVEHLNKAKDVI
HEPPIYLEGERDDIMVEISMQYNTGFSSNIISFANNIHTYEGGTHESGFKTALTRVINDY
ARRNKVFKDSDDNLSGEDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARSITDKLFSEA
LNKFMMENPDVAKKIVEKGVVASRARLAAKRAREVARKSSGLEISSLPGKLADCSSRNPE
ISELYIVEGDSAGGSAKQGRDRLFQAILPIRGKILNVEKARLDRILANEEIRTIFTAMGT
GFGGDFDVSKARYHKLIIMTDADVDGAHIRTLLLTLFYRYMRPLLDAGYIYIAQPPLYQI
KHGKQIEYVYSDGQLEDYLASLDKDTKYSIQRYKGLGEMNPEQLWDTTMNPEHRTLLQVN
IKDAIDADETFEMLMGDRVEPRRKFIEENAQYVKNLDV
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
gtgcatgaaagtgcttcagattataacgaagatcaaattcaagtactcgaaggcttagaa
gctgtaagaaagagaccaggaatgtacattggttcaactagccaacgtggactccatcac
cttgtatgggaaattgttgataacgcaatcgatgaagcgcttgctggtttttgtacagaa
attgaaattactatcgaagcagataatagtattacagttcgcgataatggacgcgggatt
ccaactggaattaacgaaaaaattggtcgtccaaccgtagaagttattttcactgtgctt
cacgctggtggtaaatttggcggaggcggatataaagtatcaggaggacttcacggagtt
ggtgcgtctgtagttaacgctctttccacgtcccttgaagtatacgttcatcgtgaaggg
caaaaatattaccaacgttttgaacgtggtgatgtagtaatggatatggaagaacaaggt
gaaactgattatcgcggaactattgttcattttactccagacccacaaattttcacagaa
acaaccgaatttgattttgatacgcttcgtactcgtacacgtgaacttgctttcttgaat
cgtggtttaaccatttcgattgaagataaacgcgaagaacacaaagtacgtaaagatttc
cactatgaaggcggaattcgttcttacgtggaacatttaaacaaagcaaaagacgttatc
catgagccaccaatttatttggaaggcgaacgcgatgatattatggttgaaatttccatg
cagtataatactggtttctcaagcaatatcatttcatttgcaaacaatatccatacgtat
gaaggtggaacacacgaatctggttttaaaacggctttaacgcgggttattaatgactat
gcgcgccgcaacaaagtatttaaagatagtgacgataacctttctggtgaagatgttcgt
gaaggtttaactgcgattatttcgattaaacatcctgatccgcagtttgaaggacaaaca
aaaactaaactcggaaattcagaagctcgttcaatcacggataaactgttttctgaggct
ttaaataaatttatgatggaaaacccagatgttgctaaaaaaatcgttgagaagggtgtg
gtggcttctcgtgcacgtttagctgctaagcgcgcccgtgaagttgctcgtaaaagtagc
ggtcttgaaatttctagtttgcctggtaaacttgcggactgttcatcgcgtaatcctgaa
atcagcgaactttacatcgttgagggggactcagctggtggttctgctaaacaaggtcgt
gaccgtttattccaagcaattttgccgattcgtggtaaaattttgaacgtggaaaaagca
cgtttggatcgtattttagcgaacgaagaaattcgaactatttttactgcaatgggtaca
ggttttggtggagattttgatgtttcaaaagcacgttatcacaaactaattattatgacc
gatgctgatgtcgatggcgcacatattcgtacgctacttcttacactgttttatcgttat
atgcgcccgcttcttgatgcaggttatatttatattgcgcaaccgccgctttaccaaatt
aagcatggtaagcaaattgaatatgtatatagtgatggtcagttagaagattatcttgcg
tcacttgataaagacactaaatacagcattcaacgttataaaggtcttggagaaatgaat
ccagaacaactttgggatacaacaatgaatccagaacaccggacactacttcaagtaaat
attaaagacgctattgatgccgatgaaacttttgaaatgttgatgggtgaccgagtagaa
ccccgtcgtaagttcattgaagaaaatgcacaatatgttaaaaacttggatgtttaa
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