Listeria ivanovii subsp. ivanovii WSLC 3010: JL52_06765
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Entry
JL52_06765 CDS
T03400
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
lii
Listeria ivanovii subsp. ivanovii WSLC 3010
Pathway
lii03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lii00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JL52_06765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lii03019
]
JL52_06765
03016 Transfer RNA biogenesis [BR:
lii03016
]
JL52_06765
Enzymes [BR:
lii01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
JL52_06765
Messenger RNA biogenesis [BR:
lii03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
JL52_06765
Transfer RNA biogenesis [BR:
lii03016
]
Prokaryotic type
tRNA degradation factors
JL52_06765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
OB_RRP5_4th
KH-I_KHDC4-BBP
RNase_II_C_S1
S1_RRP5
KH_2
SPATA25
S1_2
RICTOR_M
CvfB_2nd
Mug135_C
Motif
Other DBs
NCBI-ProteinID:
AIS65271
LinkDB
All DBs
Position
1385704..1387875
Genome browser
AA seq
723 aa
AA seq
DB search
MSEKQVFSTEWAGKTLSVEVGQLAKQASGAALIRYGDTVVLTAAVGSKKPRPGDFFPLTV
NYEEKMYSVGKVPGGFLKREGRPSDRATLTARLIDRPIRPLFAEGFRNEVQITSTVFSVD
QDCSPEMAAMLGSSVALVISDIPFDGPIAGVDVGRIDGKYVINPTIEQAEKSDISLTVAG
THDAINMVEAGAKEVSEEAMLEAIMFGHEEIKRLCEFQQQIIDAVGKEKREIELFVSDPE
LEAEVKAASEGKMKAAIKTEEKKAREAAIEDVKEEILESYKAKELENEAEVLSEVAHILE
MIEKDEMRRLISQDKIRPDGRKVNEIRPLSSEVGLLPRVHGSGLFTRGQTQALSVCTLAP
LREHQIIDGLGTEEYKRFMHHYNFPQFSVGETGPRRAPGRREIGHGALGERALQYVIPSE
EDFPYTIRLVSEVLESNGSSSQASICGSTLAMLDAGVPIKAPVAGIAMGLVKLGDDYTIL
SDIQGMEDHFGDMDFKVAGTKDGITALQMDIKIDGLSRQILDEALTQAKEGRLHILEHLT
STISAPREELSAYAPKIITLNIKPEKIKDVIGPGGKQINAIIEETGVKIDIEQDGTVYIA
SQDQAMNRKAIAIIEDIVREVQVGEVYTGKVRRIEKFGAFVELFKGTDGLVHISELAHER
VGKVEDILKLGDEVTVKVIEVDHQGRVNLSRKVLLEKKEQPEGDKKPQAEKKYYPKKDKP
ESK
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaaacaagtattttcaacagaatgggcaggtaaaacattatctgtcgaagta
ggtcaattagcaaagcaagcaagtggagcagcattaattcgttacggagatacagttgtt
ttaacagcagctgtaggttcaaaaaaaccacgtccaggtgactttttcccgttaacagtt
aactatgaagaaaaaatgtactctgtcggtaaagttcccggtggattcttaaaacgtgaa
ggacgtccaagcgaccgtgcaacattaacagctcgtttaattgaccgtccaattcgtcca
ctttttgcagaaggtttccgtaatgaagttcaaatcacttccacagtattcagtgtagac
caagattgctcaccagaaatggcagcaatgttaggatcatctgtagcgctcgtgatttct
gatattccatttgatggcccaattgcaggtgtggatgttggtcgcattgatggcaaatac
gttatcaacccaactattgaacaagcagaaaaaagtgatattagcttaacagttgctggg
acacatgatgcaatcaacatggtagaagcaggagcgaaagaagtttcagaagaagcaatg
cttgaagcgattatgtttggtcatgaagaaattaaacgtctttgtgaattccaacaacaa
attattgacgctgttggaaaagaaaaacgcgaaatcgaattatttgtaagcgatcctgaa
cttgaagcagaagtaaaagcagcaagtgaaggtaaaatgaaagcagcaatcaaaacagaa
gagaaaaaagctcgtgaagctgctattgaggatgtaaaagaagaaattttagaaagttac
aaagcgaaagaacttgaaaatgaagcagaagttcttagtgaagtagcacatattttagaa
atgattgaaaaagatgaaatgcgtcgtcttatttctcaagataaaattcgtccagatggt
cgtaaagtaaacgaaattcgtccgctttcttctgaagttggtttacttccacgcgtccat
ggttctggtttatttactcgtggacaaacccaagctttaagtgtttgtacgcttgctcca
ttacgcgaacaccaaattattgatggcttaggaacggaagaatacaaacgtttcatgcat
cattataatttcccgcaatttagtgttggggaaactggtcctcgtcgtgctcctggtcgt
cgtgaaatcggtcacggtgctttaggtgaacgtgctttacaatatgtaatcccttctgaa
gaagatttcccatacactattcgtcttgtatcagaagtacttgaatcgaatggttctagt
tctcaagcaagtatttgtggatctacacttgctatgcttgatgcgggtgtgccaattaaa
gcaccagttgcaggtatcgcaatgggacttgtgaaactgggcgatgattacactatcctt
tcagatatccaaggtatggaagatcattttggcgacatggatttcaaagttgctgggaca
aaagatggtatcactgcacttcaaatggacattaaaattgacggattaagccgccaaatt
ttagatgaagcattaactcaagctaaagaaggtcgcttgcatatcctggaacacttaaca
agcacaattagcgcaccacgcgaagaactttctgcgtatgcaccaaaaattattaccctt
aacattaaaccagaaaaaattaaagatgttattggacctggtggaaaacaaatcaatgca
attattgaagaaactggcgtgaaaattgatatcgagcaagatggtacagtttatattgct
tctcaagaccaagcaatgaaccgtaaagcgattgcgatcattgaagacattgttcgcgaa
gttcaagtaggggaagtttacacaggtaaagttcgtcgtattgaaaaatttggtgcattt
gttgaattattcaaaggaacggatggtttagttcatatttctgaattagcacatgaacgc
gtaggaaaagtagaagatatcttaaaacttggtgatgaagttactgtgaaagttatcgaa
gtcgatcatcaaggccgtgttaacttatcgcgtaaagtattacttgagaaaaaagaacaa
ccagaaggcgataaaaaaccgcaagctgagaaaaaatactatcctaagaaagacaagcct
gaatctaaataa
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