Listeria ivanovii subsp. ivanovii WSLC 3010: JL52_07860
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Entry
JL52_07860 CDS
T03400
Name
(GenBank) ribonuclease E
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
lii
Listeria ivanovii subsp. ivanovii WSLC 3010
Brite
KEGG Orthology (KO) [BR:
lii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lii03019
]
JL52_07860
03009 Ribosome biogenesis [BR:
lii03009
]
JL52_07860
Messenger RNA biogenesis [BR:
lii03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JL52_07860
Ribosome biogenesis [BR:
lii03009
]
Prokaryotic type
rRNA processing factors
JL52_07860
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
S1
RNase_E_G_Thio
Motif
Other DBs
NCBI-ProteinID:
AIS65479
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All DBs
Position
complement(1611323..1612681)
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AA seq
452 aa
AA seq
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MKKVVISAAYIEKRIAVLEDGQMIDMEVIRPSDKTQVGDIFYGFIQKIDRKINAAFVDLG
NQNKGFIHLKDIPDIYEKTQGAKLPVQIIREGSATKLPLLTAELTFPGDLLVYLYGKEYI
SISKRIMDKEPLKETIELLLGENEAVIIRSSAEKATKEQLEKALNEAREEYEQVILKSNK
RKKPGLLLSAAYGVFASAKQFIQRYQPDEIITDDFEFARVLESNWPDQVTLTKSADLFAD
LSIKKQIDRLNRPVVHLSNGSSLFIEKTEAMWVIDVNSGRYKSSTEKEKTVEFVNQKAVP
EILKQIRLRNMSGMILVDFIGGMSERGYTELYEALERQTREEYTTTQVAALSQSGLLQLT
RRKKQQSFLEATTIPCPICYGTGHVASKETLAYQLERELTGIMQGEPESVQIITTEDVLD
TFLDLNTLNDAPVEWEVADERIPFYQILRVEK
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagtagtaattagtgcagcttatatagaaaaaagaatagcggtccttgaagat
gggcaaatgattgatatggaagttattaggccatctgataaaacccaagtgggtgacatt
ttttatggttttattcaaaaaatcgaccggaaaataaatgctgcttttgttgacttaggc
aatcaaaataagggttttatccatttgaaggatattccagatatttacgagaaaacacaa
ggtgccaaactgcctgttcaaattattcgcgaaggcagtgcgactaaacttccactttta
accgctgaactaacatttccaggagacttacttgtttatttatatggaaaagaatatatc
tctatttcaaaaagaattatggataaagagcctttgaaagaaacaatcgaattgctttta
ggagaaaatgaagctgtgataatccgctcaagtgccgaaaaagccacgaaagaacagttg
gaaaaagcgctaaatgaagctagagaagaatacgagcaagtaattctaaaaagtaataaa
cgaaaaaaaccagggttacttttatctgcagcttatggggtgtttgctagtgctaaacaa
tttattcaacgttatcaaccagatgaaattattacggatgattttgagtttgcgagagtg
cttgagtcgaattggccagatcaagtaactctaacgaaaagtgcagacttatttgctgat
ttaagtataaaaaaacaaatcgatcgtctaaatcgtcctgtagttcatctttcgaatggt
tcttctttatttattgagaaaacagaggcgatgtgggtgatagatgttaactctggccgc
tataaaagttctacagaaaaagaaaaaacggtagagtttgttaatcaaaaagcagttcca
gaaatacttaaacaaattcgccttcgtaatatgagtggcatgattttagtagattttatc
ggcgggatgtcagaaagaggctacacagaactctatgaggcgctagaacggcaaacacga
gaagaatatactacaacccaagttgcggcgctttcgcagtcagggcttcttcagctaacc
agacgaaagaaacaacagtcatttctagaagctacaacgattccttgtccgatttgctac
ggaacaggtcatgtagcgtctaaagagacacttgcataccaattagaaagagaacttaca
gggattatgcaaggggagccagaaagtgtccaaatcattacaacagaagatgtattagat
acttttctagatttaaacaccttaaatgatgctcctgtcgagtgggaagtagcagatgag
cggataccgttctatcaaattttacgtgtagagaagtaa
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