Listeria ivanovii subsp. ivanovii WSLC 3010: JL52_08015
Help
Entry
JL52_08015 CDS
T03400
Symbol
dnaE
Name
(GenBank) DNA polymerase III DnaE
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lii
Listeria ivanovii subsp. ivanovii WSLC 3010
Pathway
lii03030
DNA replication
lii03430
Mismatch repair
lii03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JL52_08015 (dnaE)
03430 Mismatch repair
JL52_08015 (dnaE)
03440 Homologous recombination
JL52_08015 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lii03032
]
JL52_08015 (dnaE)
03400 DNA repair and recombination proteins [BR:
lii03400
]
JL52_08015 (dnaE)
Enzymes [BR:
lii01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JL52_08015 (dnaE)
DNA replication proteins [BR:
lii03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JL52_08015 (dnaE)
DNA repair and recombination proteins [BR:
lii03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JL52_08015 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
POT1
DUF655
Motif
Other DBs
NCBI-ProteinID:
AIS65509
LinkDB
All DBs
Position
complement(1647596..1650922)
Genome browser
AA seq
1108 aa
AA seq
DB search
MGFVHLQVSSAYDLLSSTASIDSLVTKAKEYHYPALAITDKNVLYGAVEFYQKCLAADIK
PIIGMTVTIQGYLNPINSYELILIAEKTAGYHELLKIASAIQTREEGQELPQSWLRAYSS
DLIAISPGAKGEVERLLMEENQDGALEAYQNLVTIFGEDSVYLSLQKENPRLFAKIQTFC
AEENIRAVATKDVQYMEPKDAQAKGVLTAIRDNRTVDWTTLPLAGPNYFTSQEEMERDWQ
TDFEKMACEETGKLADRCQVEIALDQHLLPRFPLKADQNAPEILRQTAYAGLAERELMAP
EYQERLDYELKVITEMGFADYFLIVWDVIRYSREAGILTGPGRGSAAGSLVSFALRITDV
DPIKYNLLFERFLNPERITMPDIDLDFPDNRRDEVISYVVSKYGEAHVAQIGTFGTLAAK
AAIRDTARSFGLNSVLLSEWSKLIPSQLGITLHKAIQENPRLENHIKSSKVNEMIWEVAC
QLEGLPRHISTHAAGIVISDKPLVEQVALQLGSGDARLTQFAMGELEKIGLLKMDFLGLR
NLSLLDRVLKSVNYTREKPLTLADISLEDEKTLKLFQTGDTTGVFQFESDGIRRVLRKLK
PTSFEDIVAVDALYRPGPMEQIDTFIARKHGKEAIQYPHPDLAPILEVTYGVIVYQEQII
QVANQMAGFSLGEADLLRRAVSKKKADVLQEERIHFVEGARSKGYSESSANQVYDMIVQF
ANYGFNRSHAAAYSKIAFQLAYLKANYPAAFMSSLLSSVFGNDDKIAQYITEAKNYGIRM
LAPSINHSNYYFQMESETSIRYSFRVIRKVPTKFVLEIINERKKAPFQDFFDFCERMPHK
MLSETVLEALVLSGCFDEFGEDRATILATIDAVLQYISLLGEDSKGMNLFAEDDDFLKKM
KPRYRKTAPISIDEKLEKEKLYTGQYVSAHPVSYYQTKLQNLTITRLANISSGKTYQVAV
YVHEVKSIRTKKGETMCFMTISDDTKELSAVMFPESYRKYASLAQKGEILFLHVKADKRN
GELQLIVNQAEDLKEVKAPARLFIKLTEPVQMEQLRPILLQFKGESKVIIHQALTKQTTE
LKNIQVTPSNELQEALVELLGKENVVFK
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
gtgggatttgttcatttacaagtttcgagcgcatatgatttactttcaagtacggcgtcg
attgattcgcttgtcactaaagcaaaagaataccattatccagccttagcaattacggat
aaaaatgtgctttacggagcagttgagttttaccaaaaatgtttagcagcggacataaaa
ccaattattgggatgacagtaacaatacaaggttatttaaatcctattaattcctatgag
ttgatattaattgcggaaaagactgctggatatcatgagttacttaaaatcgctagtgcc
attcaaacgcgtgaagaaggacaagaacttccgcagagttggctacgagcttatagtagt
gatctcatcgcgatttcgccaggtgccaaaggggaagtagagcggttgcttatggaagaa
aatcaggatggggcattagaagcctaccaaaatttagtcactatttttggcgaggattct
gtttatttgtcgttacaaaaagaaaatccccgcctttttgcaaaaatccaaacgttttgt
gcggaagaaaacattcgtgcagtagcaacaaaggatgtacaatatatggaaccaaaagat
gcgcaagcgaaaggagtgttgacggccattcgagataatcgtacggttgattggacaaca
ctaccacttgcaggtcctaattactttacctcacaggaagaaatggagcgagattggcaa
accgactttgaaaaaatggcgtgtgaggaaactggcaaattagcagatcgatgccaagtg
gaaattgctttagaccaacatttattgccacgtttccccttgaaagctgaccaaaatgcg
ccggagattttacgacaaacggcctatgctggattagcagagcgtgaattaatggcgcca
gaatatcaagagcgtttggattatgagttaaaagtaatcacagaaatgggatttgcagat
tattttcttatcgtctgggatgttattcgttattctagagaggccgggattttaacaggt
cctggtcgtggctcggcagcgggatcgttagtttcttttgcgttaagaattaccgatgtt
gatccaattaaatataacttgttatttgagcgttttttaaatccagagcgaatcaccatg
ccagatattgacttggatttcccagataatcgtcgtgatgaagtaatttcttatgttgta
tcgaaatacggggaagcacatgtggcgcaaattggtacatttggtacacttgcagcaaaa
gccgcgattcgtgatacggcaaggagctttggtctgaattccgtgcttttatctgagtgg
tctaaacttatcccaagccaattagggattactttacacaaagcgattcaagaaaatccg
cggctagaaaaccatataaaaagttcgaaagtaaatgaaatgatatgggaagtagcctgt
cagctagaagggttaccgcgccatatttccacccatgcagctggaattgtcattagtgat
aaaccgcttgttgaacaagtcgctctgcaattaggtagcggcgatgcacgcttaactcag
tttgctatgggggaattagaaaaaattggcttacttaaaatggactttcttggacttaga
aatttaagtttacttgatcgtgtgttaaaatcggtcaattatacccgagaaaaaccacta
actttggcagatatttcactagaagatgaaaaaacgttaaaattattccaaactggggat
acaacaggtgttttccaatttgaatctgatggaattcgtcgcgtacttcggaagttaaaa
ccaacttcttttgaagatattgttgcagtagacgcgctttatcgcccaggcccaatggag
caaattgatacatttattgctagaaagcatggaaaagaagcaatacaatatccgcatcct
gatttggcgccgattttagaagtgacatatggcgttatcgtttatcaagaacaaattatt
caagttgctaatcaaatggctggattttcacttggcgaggcagatttattacgtcgcgca
gtaagtaagaaaaaagcagatgtgctacaggaagaacgcatccattttgtagaaggggcg
agaagtaaaggctattctgaaagtagcgccaatcaagtctatgatatgattgtgcaattt
gcaaattacggatttaaccggagtcatgccgctgcatattccaaaattgcctttcaatta
gcttaccttaaagcaaactatccagcagcgtttatgtcttccttactaagttctgttttc
ggaaatgacgataagattgcccaatatattaccgaagcaaaaaattatggtattcgtatg
ttagctccaagtattaatcatagtaattattatttccaaatggaaagcgaaacatctatc
cgctatagttttcgcgtcattcggaaagtaccaaccaagtttgttctcgaaattatcaac
gaacgaaaaaaagcgcctttccaagacttctttgatttttgtgaaagaatgccccataaa
atgttgtcagaaacggtattagaagcgttagtcttatccggatgttttgatgagtttgga
gaagaccgggcaactattttggcgacgattgatgcagtactgcaatacatttctcttctc
ggtgaagattctaaagggatgaatctttttgcagaagacgatgatttcttgaagaaaatg
aaaccacgttaccggaaaacagcacccatttcaatagatgaaaaattagaaaaagaaaaa
ctgtatacaggtcaatatgtatcggcgcatccagtatcatactatcaaacaaaattacaa
aatttgactattactagacttgcgaatattagttccggaaaaacgtatcaagtagctgtt
tatgtccatgaagtaaaatctattaggacaaaaaaaggcgaaaccatgtgctttatgaca
attagtgatgatacgaaagaattaagcgctgtgatgtttccagaaagctatcgcaagtat
gcatcacttgctcaaaaaggagaaattcttttcttacatgttaaagcggacaaaagaaac
ggagaacttcagctaattgtcaaccaagcagaagatttaaaagaagtgaaagctcctgcg
agactatttatcaaattaaccgaaccagtacaaatggaacaattaagacctattttgtta
caatttaaaggggagtcaaaggttattatccatcaagccttgactaagcaaacaaccgaa
ttaaaaaatattcaagttacaccgtcaaatgaattacaagaggcgctagtagagctcctt
gggaaagagaatgttgtttttaagtaa
DBGET
integrated database retrieval system
