Listeria ivanovii subsp. ivanovii WSLC 3010: JL52_08425
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Entry
JL52_08425 CDS
T03400
Name
(GenBank) helicase SNF2
Organism
lii
Listeria ivanovii subsp. ivanovii WSLC 3010
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Gene cluster
GFIT
Motif
Pfam:
SNF2_assoc
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SWIM
Motif
Other DBs
NCBI-ProteinID:
AIS65583
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Position
complement(1735967..1739185)
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AA seq
1072 aa
AA seq
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MEHFTAIQNKMIPYSVKQAGKKLMEDGEIIQFFEKDATGHFLTYFIDQNVVEDAGNENYA
CSCADFQLNAICKHIYATHLKMEKQKQKAAKQDFKNRILTQESNTLLSLFQQNMAQQLDV
EEDNTNKIPLLTQYIIRLKPDDSSYIMTIEVKVGTERTYVVKNMNIFLAAVRDRQWLVFT
KNFAYDPNEHYFTEADKKILEKLLQISEIAKMYDTDTFYWNKSYAEEKNLTIPPSMASDL
LELLSERDTMCIIMKDRVEDIKYRGLAVRHEQLDFIFELRKSSDDKYQLEMEDLQQAIFL
EAYQLLFFDGTFFIPTHEVWESLKPLMEFHKVTKNEVVQFSESQLSEVVSYVLPALQKSG
KLKLDDSIEGRITQQPLDCKLFIALEYGEHTLRLEYHYGNQQFDPFVTTEEENEKIMIRD
VEKEARVMNILESAPVHFSGTKMVVNKQEKELYQFYYRTIPKLAEFAEIYMEDGLEEMVE
DNVRPVTTLDVTGDNDYLSVTFDFKGIPEEEVQNVLESLREKRSYHRLKNGRFLSLESEN
YKQMEDVLQMLEVRKKDVQSNMQVPLYRGMQIYDILGAGTQDEHHKFSRSFRELLTDITT
QSEDSFDLPSGLKTELRDYQLTGFEWMKSLAKYNLGGILADDMGLGKTVQTISFLASELE
DNPNLKPVLIVTPASLLYNWQSELEKFAPMIPVSVLHGTKESRMVEMKEMKRGHVYLISY
PSLRQDILNLSDVAFSSVIIDESQAIKNYHTKASQAVRALKRNHVFALSGTPLENSIDEL
WAIFQTLMPGFFPSLRKFKEIPYENIAKMIRPFLLRRLKQDVVKELPDKIETNLYSELTD
EQKTIYLAYLEKIQADLEESSGNASEERIKLLAGLTRLRQICCDPSLFVENYQGESGKLL
QLFDTIQTARENGKRILIFSQFTGMLAIIRRKLEEDGQTFFYMDGKTPAKTRLDMVNSFN
GGENDIFLISLKAGGTGLNLVGADTVILYDLWWNPAVEEQATGRAHRIGQKRVVQVFRMI
TKGTIEERIFDLQKKKQALVDELIQPGEQMLGKLSTEEIKQILQLDNGRDEK
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atggagcactttaccgcaattcaaaataaaatgattccatatagtgttaagcaggccgga
aaaaaactgatggaagacggagaaattattcagtttttcgaaaaggatgcaacaggtcat
ttcctaacatattttattgatcaaaatgtagtggaagatgctggaaatgaaaattatgca
tgtagttgtgcagattttcagctgaatgcgatttgcaagcatatttatgcgacacattta
aaaatggaaaaacaaaaacaaaaagcagctaaacaagattttaaaaatcgaattcttacg
caagaatccaatacacttctatccctttttcaacaaaatatggcgcaacaactcgatgta
gaagaagataacacgaataaaataccgcttctgacgcaatatattattcgtctgaagcca
gatgattctagctatatcatgacgatcgaagtgaaggttgggacagaacgaacgtatgtc
gtgaaaaatatgaatatatttcttgctgcagttcgtgaccggcagtggctcgtatttacg
aaaaattttgcttatgacccaaacgaacattattttacagaagcggataaaaaaattcta
gaaaagcttcttcaaatcagtgaaattgcgaaaatgtatgatacggatactttttattgg
aataaatcttatgcagaagaaaagaacttaacgattccgccaagtatggcaagtgactta
ttagaactcttgtctgaacgtgatacgatgtgtattattatgaaagatcgagtggaagat
attaaatatcggggtctagctgttcgtcatgagcaattagatttcatcttcgaacttaga
aaaagttctgatgataagtaccaattggaaatggaagatttacagcaagcaatctttttg
gaagcatatcaactcctattttttgatggtactttttttattccaacacatgaagtatgg
gaatctttaaaaccactgatggagtttcataaagtaacgaaaaatgaagtcgtgcaattt
tctgagtcgcaattaagtgaagtcgtttcttatgttttaccagctttacaaaagagcgga
aaactaaaattagacgattcgattgaaggacgtattacgcaacaaccacttgactgcaaa
ctctttatcgcgttagagtacggcgaacatactttgcgactagagtatcattacggcaat
caacaattcgacccatttgttacaacagaggaagaaaatgaaaaaatcatgattcgagat
gttgaaaaagaagcacgagtgatgaatattttagaaagcgcacctgttcatttttctgga
acaaaaatggtagtgaacaagcaagaaaaggagctctaccagttttattaccggacgatt
cctaagcttgcagagtttgcggaaatatatatggaagatggactggaagaaatggtggaa
gataatgttcgtcctgtaacaacattagatgttactggcgacaatgattatctttccgtg
acctttgattttaaaggtatacctgaagaagaagtccaaaatgtcctagaatctttacgc
gaaaaacgaagctatcatcgtttgaaaaatggtcgtttcttatcactagaatcagaaaac
tataaacaaatggaagacgttcttcagatgctcgaagttcgtaaaaaagatgtccaaagt
aatatgcaagttccactttatcgagggatgcaaatttatgacattctaggagcaggaaca
caagatgaacatcataaattcagccgatcatttcgcgaattattaacggatataactaca
caatctgaggatagttttgatttaccaagcggattaaaaacggaattacgtgattatcaa
ctgacaggatttgaatggatgaaatcacttgctaaatacaatcttggcgggattttagcc
gatgatatgggactggggaaaacagttcaaaccattagtttcctagcatcggaattagaa
gataatccgaacttaaaaccagtattaatcgttacaccagcttctctactatacaactgg
caaagcgaacttgaaaaatttgcgccaatgatccctgtttccgttttacatggaacaaaa
gagtcgcgcatggttgaaatgaaggaaatgaagcgtggccatgtctatttaatttcgtat
ccatcgcttcgtcaagatattttgaatctctcggatgttgctttttcaagtgttattatt
gatgaatcacaagccatcaaaaactatcacacgaaagcgtcgcaagccgttcgagctttg
aaacggaatcatgtttttgcattaagtgggacaccgcttgaaaatagcattgatgaactt
tgggcaatttttcaaacattaatgcctgggtttttcccatcgctacgaaaatttaaagaa
attccgtatgaaaatattgcaaaaatgattcgaccatttttactgcgacgtcttaaacaa
gatgtagtaaaagagttacctgataaaattgagacgaatctttattctgaattgaccgat
gaacaaaaaacgatttacttggcttatttagaaaaaattcaagctgatttggaagaaagt
agtggcaatgcttctgaagaacggattaaattgctagcaggattaacccgtttacgccaa
atttgctgtgatccaagtctttttgtcgaaaattatcaaggtgaatctggtaaactacta
cagttatttgatacaatacagacagcaagagaaaacggtaaacgaatcttgattttttct
cagttcacaggaatgctcgcgattattcgccgcaaactagaagaagatggtcaaacattc
ttctatatggacgggaaaacaccagcgaaaacgaggttggatatggttaactcctttaat
ggaggggagaatgatattttcttgatttctttaaaagctggaggaacaggattgaatcta
gttggtgctgacacagtgattttatatgatttatggtggaatccagctgtagaagaacaa
gcaactggacgggctcaccgaattgggcaaaaacgtgttgtccaagttttccggatgatt
acaaaaggtaccattgaagaacgaatttttgatttacaaaagaaaaaacaagccctggtg
gatgaacttatccaaccaggtgaacaaatgctaggaaaacttagcacagaagaaattaaa
caaattttacaattggataatggaagggatgaaaaataa
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