Listeria ivanovii subsp. ivanovii WSLC 3010: JL52_08890
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Entry
JL52_08890 CDS
T03400
Name
(GenBank) RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
lii
Listeria ivanovii subsp. ivanovii WSLC 3010
Brite
KEGG Orthology (KO) [BR:
lii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lii03009
]
JL52_08890
Enzymes [BR:
lii01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
JL52_08890
Ribosome biogenesis [BR:
lii03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
JL52_08890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
Methyltransf_15
MTS
Methyltransf_11
TRM5-TYW2_MTfase
Methyltransf_32
Methyltransf_12
UPF0020
PrmA
Motif
Other DBs
NCBI-ProteinID:
AIS65648
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Position
complement(1819165..1820544)
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AA seq
459 aa
AA seq
DB search
MNQNPVEEGQKFPLTIRRMGINGEGIGYFKKAVVFVPGAITGEEVVVEAVKVRDRFTEAK
INKIRKKSPNRVTAPCPVYEACGGCQLQHVAYSAQLELKRDIVIQSIEKHTKIDPQKLNI
RATIGMEDPWRYRNKSQFQTRLVGSGQVETGLFGVNSHQLVPIEDCIVQQPMTIKVTNFV
RDLLEKYGVPIYDEKAGSGIVRTLVVRTGVKTGETQLVFITNSKKLPKKREMLAEIEAAL
PEVTSIMQNVNQAKSSIIFGEETFLLAGKESIHEKLMELEFDLSARAFFQLNPFQTERLY
QEVEKALVLTGSETLVDAYCGVGTIGQAFASKVKEVRGMDTIPESIEDAKRNAEKNGLEN
VYYEVGKAEDVFPKWMKEGFKPDAVIVDPPRSGCDQGLIGSLLQAEAKQLVYVSCNPSTL
ARDLALLAKKYRVRYMQPVDMFPQTAHVETVVLLELKNN
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaaatccagtagaagaaggacaaaaattcccactaacgattagacgcatggga
atcaacggggaaggaatcggctactttaaaaaagcggtcgtatttgtgcctggcgcaatt
accggcgaagaggtagtggtagaagcagtcaaagttcgggaccgctttaccgaagcaaaa
attaataaaattcgcaaaaaatctcctaaccgagttaccgcaccatgcccagtatacgag
gcatgtggcggatgccagctccaacatgtggcctatagcgctcaacttgaattaaaacga
gatatagtaattcaatcaatcgaaaaacatacgaaaattgatccgcaaaaattaaatatc
cgtgctactatcggcatggaagacccttggcgttaccgtaataaaagtcagtttcaaaca
cgtttagttggtagtggccaagtagagacaggtttatttggagtgaattcgcaccaatta
gtaccaattgaagattgtatcgttcaacaacctatgacaattaaagttactaattttgtc
cgtgatttgctcgaaaaatatggcgttccgatttacgacgaaaaagcaggcagtggaatt
gtccggacgcttgttgttcgaaccggtgtcaaaactggagaaacgcagcttgttttcatt
acaaacagtaaaaaactaccaaaaaaacgtgaaatgctcgcagaaatcgaagcagcttta
ccagaagtaacctcgattatgcaaaatgttaaccaagctaaatcttctatcatttttggc
gaagaaacattcctgttagcaggaaaagaaagcattcatgaaaaactaatggaactggaa
ttcgatttatctgcccgtgcctttttccaattaaatccattccagaccgaacgactttat
caagaagtagaaaaagcactcgtacttactggcagtgaaactttagtcgatgcttactgt
ggtgttggaacgattggtcaagcatttgcatcaaaagtaaaagaagttcgcggcatggac
actattccagaatcaattgaagacgctaaacgaaacgccgaaaaaaatggtttagaaaat
gtatactatgaagttggaaaggcagaagatgtttttccaaaatggatgaaagaaggcttc
aaaccagacgccgtaattgtcgatccaccaagaagtggctgtgatcaaggcttgattggg
tcattactacaagcagaagcaaaacaactcgtctatgtttcttgtaacccgtcaacactc
gcacgtgacttggctctgcttgcaaaaaaatatcgcgtgcgttacatgcaacccgtcgat
atgttcccacaaacagcacatgtggaaacggtggtgcttttagaactcaaaaataactaa
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