KEGG   Listeria ivanovii subsp. ivanovii WSLC 3010: JL52_09910
Entry
JL52_09910        CDS       T03400                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
lii  Listeria ivanovii subsp. ivanovii WSLC 3010
Brite
KEGG Orthology (KO) [BR:lii00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lii03400]
    JL52_09910
Enzymes [BR:lii01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     JL52_09910
DNA repair and recombination proteins [BR:lii03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    JL52_09910
SSDB
Motif
Pfam: Helicase_C_2 RNase_T DEAD Helicase_C DEDDh_C DEAD_2 Asparaginase_C
Other DBs
NCBI-ProteinID: AIS65837
LinkDB
Position
complement(2031320..2034106)
AA seq 928 aa
MKQKRYIVVDLETTGNQASRDDRIIQFAACFVESGKRLETYATFLNPEKPIPAFIQELTG
ISPKDVRDAPLFEDVAPIIANLLEDTIFVAHNVSFDWTFLEREMTRAGISLGKMKKLDTV
ELARIMYPGIDSYKLQDLSDEFGLGHDKPHRADSDAEVTADLLLLLLEKLEDLPLPVIRQ
MATISGSLKSYLPELLFDIEMKKERANKALDTKFIEHRGLVIRKKEVEKPTYNRADLLDF
PETDDAKIALFKKAGAPLYARTGQFEMMNLVFQAMKSGKHALIEAGTGIGKSLGYFLPAI
YQAKQAKLPVVISTYTNLLQAQLFEKDVPLLTKLTGFEVKASLLKGRDHYLNLFKFEQLL
AEVDSQYDIVVTKLKLLVWLTETTTGDIDEVNLSSGGELFWNRMKHTGWFLSEKHDPWLA
HDFYKFNVEQAKNADLVIVNHALLLSDHFSGRQTLPKYAFAVIDEAHHFADSARTQGSFV
LSYRKLKYFLNQLGSLEKYSLLTRLSMAFPDADSLYDLDIAAMKLGEAVEEFFHLLKMQL
SYARKNLQEVVLVENSEKDAWNEAIYYAAEKVLLLLQESEKNMETLLAQGKAEEDDLGVA
ESAFLEEMYAFLLDWKNIVNQLEQMLYKKSPILTIYLQADKKHSISSIRLKAVLMEVEPT
LGKEFFAKKESVIMTSATLTVNGKFAFLRKSLGLEEEQLVEKRIPSPFDYQKNARVMIPD
DMPPIKDTPMERYTTELAKYIRHIAVKTKGRMLVLFTASEMLQKTYYHMKNEKSLEEYVL
LAQGVSAGSAARLTKQFQMFDKAILLGTTSFWEGIDIPGEDLSCLVIVRLPFAPMDNPYT
KAQIALRKERGENAFQTYSLPEAVLRFKQGFGRLIRRESDRGIVFVFDNRVDTTRFGKAF
LDSIPNAPILKGNQADLLEEVSEFFKEG
NT seq 2787 nt   +upstreamnt  +downstreamnt
atgaaacagaaacgttatattgtggtggatctagagacaactggaaatcaagcttcacgt
gatgaccggattattcaatttgctgcttgctttgtagaatctggaaagcgactcgaaacc
tacgctacttttttaaatccagaaaagccaattcctgcttttattcaagaattaacagga
atctcaccaaaagatgtgagagatgctccgctatttgaagatgtagcaccaatcattgct
aatctattagaagataccatatttgtcgctcataacgtttcttttgattggacatttttg
gagagggaaatgactcgtgcaggtatttcgcttggaaaaatgaaaaaattggatacagtc
gagttagcaagaataatgtatccaggaattgatagttataaactacaagatctgtctgat
gaatttggacttggtcatgataaaccacaccgagcagatagtgacgctgaagtaacggct
gatttattactgttacttcttgaaaaactagaagatttgccacttccagtaattcgccaa
atggcaacaatttctggtagtttaaagagttatttaccagagctattatttgatattgaa
atgaaaaaagaacgggccaacaaggctttagatacgaagtttatagaacaccgcggtcta
gttattcgtaaaaaagaagtagaaaaacctacctacaatagagcagatttacttgatttc
ccagagacagatgatgccaaaatagcactttttaaaaaggcaggggcaccactttatgcg
agaactgggcaatttgaaatgatgaacctcgttttccaagcaatgaaatcgggcaagcat
gctttaattgaggcaggaacaggaattgggaagtcacttggttattttctgccagcgatt
tatcaagcaaagcaagcaaaattgccggtcgttattagcacttatacgaacttgcttcaa
gcacaattatttgaaaaagatgtgccactacttacaaaactgactggtttcgaagtaaaa
gctagcttacttaaaggccgtgatcattatttgaatttatttaaatttgagcagttactt
gcggaagtggattcccagtacgatatagttgtaacgaaattaaagttacttgtttggctt
acggaaacaacaactggggatattgatgaagtgaacctatccagtggtggtgaattgttt
tggaatcggatgaagcacactggttggttcctatctgaaaaacatgatccgtggctagcg
catgatttttataaatttaatgtggagcaagcaaaaaatgctgatttagttattgtgaat
catgcactgttactaagtgaccatttttctggaagacagacgcttccaaaatatgctttt
gcagtaatcgatgaagcccatcattttgcagatagtgccagaacacagggaagttttgta
ctgtcgtatcgaaaattaaagtatttcttaaatcagttaggctctttagaaaaatattcc
ttgttaacacggctttcgatggcatttccggatgcagatagtttatatgatttagatata
gcagcgatgaaacttggagaagcagtagaagaatttttccacttactaaaaatgcaacta
agctatgctcgtaaaaatctgcaagaagtagtgcttgtggaaaacagtgagaaagatgca
tggaatgaagcgatttattatgccgctgaaaaagtacttcttttacttcaagaatctgag
aaaaatatggaaacattacttgcacaaggaaaagccgaagaagatgacttaggtgtagca
gaaagtgcctttttagaagaaatgtatgcttttttacttgattggaaaaatatcgtaaat
caattagagcaaatgctgtataaaaaatccccaatcctaactatatacttgcaagctgat
aaaaaacattctatatcaagtattagattgaaagctgtattaatggaagtggagccgaca
cttggaaaagaatttttcgcgaaaaaagaaagtgtcattatgacctcggcaaccttaacg
gtgaacggcaagtttgcttttttacgaaagagtttaggcttagaagaagagcaattagtg
gaaaaaagaattccttcgccatttgattatcaaaaaaatgcgcgagtgatgattccagat
gatatgccgccaattaaagatacaccgatggaacgatatacaacggaactggcgaaatac
attaggcatattgcagtcaaaacaaagggacgaatgttagtcctgtttactgcttctgaa
atgcttcagaaaacgtattatcatatgaaaaatgagaagtcattagaagaatatgtttta
cttgcacagggtgtttcggcaggaagtgcagcgagattaacgaagcaattccaaatgttt
gataaagcgattttgctagggactactagtttttgggaagggatagacattccgggtgag
gacttatcgtgtttagtcattgtcaggttaccatttgcaccgatggacaatccgtataca
aaagctcaaattgccctgcggaaagaacgtggcgaaaatgcctttcaaacttattccttg
ccagaagctgttcttcgttttaaacaagggttcggtcgtttaattcgccgagaatctgat
cggggcattgtctttgtttttgataaccgcgttgatacaaccaggtttggaaaagcattt
ttagattctatccctaacgcacccattttaaaaggaaaccaagccgatttattagaagaa
gttagtgaattctttaaggaaggttaa

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