Listeria ivanovii subsp. ivanovii WSLC 3010: JL52_10125
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Entry
JL52_10125 CDS
T03400
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lii
Listeria ivanovii subsp. ivanovii WSLC 3010
Pathway
lii03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lii00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JL52_10125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lii03019
]
JL52_10125
03400 DNA repair and recombination proteins [BR:
lii03400
]
JL52_10125
Enzymes [BR:
lii01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JL52_10125
Messenger RNA biogenesis [BR:
lii03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JL52_10125
DNA repair and recombination proteins [BR:
lii03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JL52_10125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
AAA_22
Cas3-like_C_2
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
AIS65878
LinkDB
All DBs
Position
complement(2076274..2077680)
Genome browser
AA seq
468 aa
AA seq
DB search
MTLEKELKSYLGFKEFRPGQKEVIEATLAGNNTFAMLPTGTGKTVCYQLAGHLMDGLVVI
VSPLLSLMQDQMERMRAHGEKRVAALNSFLKRDEKNQILANIHLYKFLFLSPEMLNNDMV
KSLLLKRKISLFVIDEAHCISQWGHDFRPDYLMLGLFIQEANFPVTMVLTATATKKVRAD
ILAQLQLKGCKQIIYSVNRSNISLQVEKFTNQKLKKERLYELVLKLQTPGIVYFSSKKLA
ESTARELSELTGLQVAYYHGDMEAEDRIMIQQQFVYGQLDLICATSAFGMGIDKSDIRFV
IHYHMPADLEAYLQEIGRAGRDSQNSVGILLYATGDEFIQMQLADQDLPDASLIHLTKEQ
LKTLPESEQRFIEYYQKSGLTTQEIATKIDYRKKWKRANLQQFIGYLHTDDCRRNYIMRY
FEEEPLGSEKPLNCCDIDGADITTFERKETIQRKEVPTWESYLTYLLQ
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgactctagaaaaggaactaaaatcatatcttggctttaaagaatttcgcccaggacaa
aaagaagtaattgaagctacgttagctggaaataacacttttgctatgttaccaacagga
actggaaagaccgtttgctatcaattagcgggacatttgatggatggcttagttgtgatt
gtgtcaccgcttctttcgttaatgcaagaccagatggaacgaatgcgtgcacatggggaa
aaacgcgttgctgcacttaatagttttttaaaacgagacgagaaaaaccaaattcttgct
aacatccatttatataagtttttatttttatcaccagagatgttgaataatgatatggtg
aaaagccttcttttaaagcgaaaaatcagtttatttgtaattgatgaggcacattgtatt
tctcagtgggggcatgatttccgcccggattatttaatgttaggtctgtttattcaagag
gcaaactttccagtaacgatggtgcttactgcaacagccaccaaaaaagttagagcggat
attttggcgcagcttcaattaaaaggctgcaaacaaattatttattctgtgaaccgttca
aacatttctttacaagtagaaaaattcacgaaccaaaaattaaaaaaagaacgcttatat
gaactagttttaaaactgcaaacgccgggtattgtgtacttttcaagtaaaaaattagca
gaaagtacagcgcgtgaattgagcgaattaactggtctacaagtagcctattatcatgga
gatatggaagcggaagataggattatgattcaacagcaatttgtttatggtcagttagat
ttaatttgtgcgacgagtgcttttggaatggggatagacaaatcagatattcgctttgtt
attcactatcatatgcctgctgatttagaggcatacttgcaagaaatcggacgagctggt
cgagattctcaaaacagcgtcggtattctactttatgcaactggagatgaatttattcaa
atgcagctagcagaccaagatttacctgatgcaagtttaatccatttaacaaaggaacag
ttgaaaacattacccgaatcagagcagcgttttatcgagtactatcaaaagagtggattg
actacccaagaaatagctacaaaaatagactaccgtaagaaatggaaacgagccaattta
cagcaattcattggttatctgcatacggacgattgtcgccgaaattatattatgcgttat
tttgaagaagaacctcttggtagtgaaaagccactaaactgttgtgatatagacggtgcg
gatattactacctttgaaagaaaagaaacgatacaacgaaaagaagtccctacttgggag
agttatttaacttacttactgcagtga
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