Litorimonas sp. RW-G-Af-16: ACJ3XI_10040
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Entry
ACJ3XI_10040 CDS
T11560
Name
(GenBank) VCBS domain-containing protein
Organism
lij Litorimonas sp. RW-G-Af-16
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HemolysinCabind
Cadherin_5
Cadherin_4
Big_9
He_PIG
Ig_DAG1
HCBP_related
BapA_N
Motif
Other DBs
NCBI-ProteinID:
XLW28876
LinkDB
All DBs
Position
complement(2124736..2132325)
Genome browser
AA seq
2529 aa
AA seq
DB search
MARFIFGSFFSDTIIGSNGRDFVFGNGGNDYIETRGGNDIVFAGSGNDIVIAGSGNDLVF
GGSGNDWIEGGSGNDYLSGSSGSDTLFAGSGNDRLYGGSGNDILVSGDGYDYLSGGSGSD
ILIFGGSDVTGYRNDYFNGGRGTDTLLLDLSAAQFESQDVADDFARFQSYIDAGSNGTFT
FTAFDLTIRSIEGLRVFVDGVEVDPADAGPDVGGGLDPVAVDDAFDVTEDDAVTGNVLAN
DQNVAGETVTLIADVDSGALTLNPDGSFTFDAGTDFDSLAAGETQTVTFTYEVSGNGTTR
QATATITITGTNDAPTISGAVSAAADEDAAAFTVDLLEGADDVDNGAELSIAGLTGLVAG
VTLDGSTVSVDPSDAAFQALAVGESQVIIINYNIVDGEGGSVAQSATITITGTNDAPTVE
ADLTAAADEDAAAFTVDLLEGADDVDNGAELSIAALTGLVAGVTLDGSTVSVDPSDAAFQ
ALAAGETQVITLNYNIVDGEGGSVAQSATITITGTNDAPTVEADLTAAADEDAAGFDIDL
LDGADDVDNGAELSIAALTGLVAGVTLDGSTVSVDPSDAAFQALAAGETQVITLEYNVVD
GEGGSVAQTATITITGTNDAPTIGEPLGVVTSEDGDAATLDLLIDAADVDNGAVLSVADV
TGLSAGITVDGTTLSVDPSNAAFQALAAGEISSFVISYNVVDGEGGSVAQEATVIVVGTN
DAPTVTGALMAAADEDAAGFDIDLLEGADDVDNGAELSIAALTGLVAGVTLDGSTVSVDP
SDAAFQALAAGETQVITLEYNVVDGEGGSVAQTATITITGTNDAPTVEADLTAAADEDSD
GFTVDLLEGADDVDNGAELSIAALTGLVAGVTLDGSTVSVDPSAAAFQALAAGETQVITL
EYNIVDGEGGSVAQTATITITGTNDDPTISGAVSAAADEDAAAFTVDLLEGANDVDNGAE
LSIAALTGLVAGVTLDGSTVSVDPSDAAFQALAAGETQVITLEYNVVDGEGGSVAQTATI
TITGTNDAPTISGAVTAAADEDAAGFTVDLLEGADDVDNGAELSVANVFGLVPGVTLDGA
SLSIDPSDAALQSLAVGESQVITLNYNIVDGEGGSVAQTATITITGTNDAPTVTALTETL
SEDASTQLIDLLVGTGDVDNGAVLSIAELPDNPLPAGFTILDNELRVAAFQNEEIQALAE
DDTLDITIDFQVVDELGLATTNSITLTFTGANDRPIVTRNTPLQELPFDEAYSFTLPANT
FVDVDTGDSLTLSASVAGGGELPDWLSFDAATGTFSGTPTTTDGGGVRVVVTATDSSGES
VSTNVTFAVGSGVILGTEEDNDLVGTSGADTFFGLEGNDRMEGLGGNDTYVIEIGDGNDI
IDDNGFNGVDTVIFNGRTLGEATITRDGASNTITFNFDNGDSVELVEALDPSFGDIESVV
FDDATLDNAALRALVIDTFTTVGGDIIFGTEFADAFEGGTGNDRMEGGSGNDTYTFNIGD
GQDIVDDGGFNGVDTLVFNGRDLDDATFTRDGGSNTFTITFDNGDSVQVIDGLDPSFGDI
ESVVFDNTTLDAAGLRAVILDTLSTDGDDFIIGTEFGDTLTGGLGNDRIEGNSGNDTYIF
NIGDGQDIVDDGGFNGLDTLQFNGRASTEAMFSRDGGSNTITISFANGDSVEVIGGLDNN
FGDIEQVVFSDGTLTDVQFRELIFDYFSTDGDDVVFGTEFNDTLEGGLGNDTLEGLSGND
TYVFNVGDGQDTVDDNGFGGVDTIRFEGRELADATFDRPDATETVTISFANGDVVTIVDG
LEGSTGTIETIEFVNPDGTVETLDNAAFQAAVLAGQITTGDDSVYGSGAAETIEAGTGND
MLFGGAGGDTYVFNIGDGQDTIDDNAFGGSDQAVFVGRTLADATFTRIGTSNDLLISFNN
GDTVEIVNGLSTTFRRIETLVFDGIPVLIEDIELTVLPIIGTDAGETLRGTVDDDTLIAG
LGDDFIEGRAGEDVYQFSAGDGADRVEDNGQTGETDTLEFRDYDQSDASFLRQGPNTVLI
EFGNGDSVRVQNGLTTGRDEIEQYAFRDQTITVQDVRDILASLQGTSGDDAIVGQAADEI
FEGFAGEDVIDGAGGDDFIDGGEGNDTLIGGTGNDTLRGGDGADTYQFASGDGSDVLQTQ
FGTADADRLVFTDYDLADATFAQGDAAEFQTNDLVVSFANGDQVRIQGFFEDSIAFDAIE
FANDTVTRSDVLAQLIADQQTDGNDIIVGFSSDDTFDGGLGDDEISGNGGDDIYLYNAGD
GADLIFETFGNDTINFGTLNAADAVVTNGLEGIRVDFGGGDSVTIAAPRPFGDGESPDFG
IVESFVFADGTLDLEGLLDLVEPPAEGIVVVGTNEGETLLGTDLSDTLTGAGGNDTIRGG
LGDDTYIYNVGDGFDFIDDAGGNDTLVLNGITPDDVFALSGVFVVDPELDGPLMPPSSIL
DIRGIDAPSGGVEFILDSIETFVFVPDVNNPDRTIILTYEELFGGDGGPGFPGGPIPVGE
VIEDTDLFV
NT seq
7590 nt
NT seq
+upstream
nt +downstream
nt
atggcacgttttattttcggtagttttttttcagatacgatcattgggtcgaatggcaga
gattttgtctttggcaatggcggcaatgattacattgaaacgcggggcggcaatgacatc
gtctttgcagggtcaggcaatgatattgttatagccggcagcggtaatgatttggtcttt
ggtgggtctggcaatgactggatcgagggcggcagcgggaatgactatttgtcaggtagc
tctggctctgacacgctctttgcgggcagcggtaatgaccgactttacggcgggtctggc
aatgatattttggtcagcggcgacggatatgactacttatctggtggctcaggcagtgac
atccttatctttggcggctcggacgtcacgggttatcgcaatgactattttaacggcggt
cgcgggactgacacgctccttcttgacctaagtgcagcccagtttgaaagccaagacgta
gccgatgactttgcgcgtttccaaagctatattgatgctggttcaaacggcacgttcact
ttcaccgcgtttgatttgacaatccgtagcattgaaggcctgcgcgtcttcgttgacgga
gtcgaagttgatcccgcagatgctggcccagatgtcggcggcggcctcgaccccgtcgcg
gtcgacgatgcgtttgacgtaacagaagatgatgccgtgacaggcaacgtcctcgccaat
gaccaaaatgtggccggcgaaactgtgacgctcatcgccgatgttgatagcggcgcgctg
acgctaaaccccgatggcagcttcaccttcgacgcaggcacagacttcgattcgctcgca
gcgggcgaaacgcaaactgtcactttcacatatgaagtgtcaggcaatggcacgacccgc
caagcgaccgcgacgatcacgattactggcacgaatgatgcgccgacgatttctggtgct
gtcagcgcagctgcggatgaagatgcagctgcatttacagttgatctccttgaaggcgct
gatgacgttgataatggtgcggaactatctatcgcgggcctcacaggtcttgtcgcaggt
gtgactctcgacggctcgactgtctctgtcgatccatccgatgcggcattccaagcgctg
gcggttggcgagtcacaagtcatcataattaattataacatcgtcgacggcgaaggcggt
tctgtcgcgcaatcggccacgatcacaattactggcacgaatgatgcgccgacagtggaa
gctgacttgacggcggcggcggatgaagatgcggctgcgtttaccgttgatctccttgaa
ggggccgacgacgtagacaatggtgcggaactatctatcgcagccctcacaggtcttgtc
gcgggtgtgactctcgatggctcgactgtctctgtcgatccatctgatgcggcattccaa
gctttggcggcgggggaaacgcaagttatcacacttaattacaacattgtcgacggcgag
ggcggttctgtcgcgcaatcggcgacgattaccatcacgggcacgaatgatgcccctaca
gtggaagctgacttgacggcggctgcggatgaagatgcggctggttttgacattgatttg
ctcgatggggctgacgacgtcgataatggtgcagaactatcgattgcagccctcacaggt
cttgtcgcaggtgtgactctcgacggctcgactgtctctgtcgacccatccgacgcggcg
ttccaagctttggcggcgggtgaaacacaagtcatcacattggaatataatgtcgtcgac
ggcgagggcggttctgtcgctcaaacggccacgatcacgattacaggcacgaatgacgcg
ccgacaatcggagagcctttgggcgtcgtgacgagcgaagacggggacgctgccacgctg
gacctcttgattgatgcagcagacgttgacaatggcgcagtgctctctgtcgccgacgtc
acagggctctcggcgggcataacggtcgatggcacaacgctgtctgttgacccttcaaat
gccgctttccaagcgctggcggctggagagatttcaagttttgttatttcatataatgtc
gttgatggtgagggcggtagcgtggctcaggaggcgacggttatcgtggtcggcacaaat
gacgcgccaactgttaccggtgcgttgatggcagctgcggatgaagatgcggctggtttt
gacattgatctactcgaaggtgccgacgacgtagacaatggtgcggaactatctatcgca
gccctcacaggtcttgtcgcgggtgtgactctcgatggctcgactgtctctgtcgatcca
tctgacgcggcgttccaagctttggcggcgggggaaacacaagttatcacgctggaatat
aatgtggttgacggcgaaggcggctctgtcgctcaaactgcgacgatcacgattacaggc
acgaatgacgcgccgacagtggaagctgacttgacggcggctgcggatgaagattctgac
ggcttcacggttgatctccttgagggtgccgacgacgttgataatggtgcagaactatcg
attgcagccctcacgggtcttgtcgcaggtgtgactctcgacggctcgactgtctctgtc
gatccatctgccgcggcgttccaagcgctagcggctggcgaaacgcaagttatcacgttg
gaatataatatcgtcgacggcgaaggcggctctgtcgctcaaacggccacgatcacgatt
acgggcacgaacgatgatcccacaatctctggcgctgtcagcgcggcggcggatgaagat
gcggctgcgtttacagttgatctccttgagggtgccaacgacgtagacaatggcgcggaa
ctatcgattgcagccctcacaggcctcgtcgcaggtgtgactctcgacggctcgactgtc
tctgtcgatccatccgatgcggcattccaggcgctggcggcgggtgaaacacaagtcatc
acgctggaatataatgtcgttgatggcgaaggcggttctgtcgcgcaaacggccacgatc
acgattacgggcacgaatgacgcgccgacgatttctggtgctgtcacggcggcagcggat
gaagacgcggctggttttacggttgatttgctcgaaggggctgacgacgtagataatggt
gcggaactgtccgttgctaatgtcttcggccttgtgccgggcgtaacattggacggcgcc
tcgctatctattgatccatccgatgcagccttgcagtctttggcggttggcgagtcgcaa
gtcatcacgcttaattacaacatcgtcgacggcgaaggcggttctgtcgcgcagaccgcg
acgatcacgattactggcacgaatgatgcgcctactgtgacagctctcaccgagacgttg
tcagaggatgccagcacacagttgatcgatcttttggtcggcacgggtgacgtggataat
ggcgcggtgttgagcattgcggaattgcctgacaatccactgcctgctgggtttaccatt
ctcgataatgagctgcgcgttgcggctttccaaaacgaagagattcaggctttagcagaa
gacgatacgctcgacatcacgattgatttccaagtagtcgatgagctgggtttggcgacg
acgaactctatcaccctgacatttacaggggccaatgacagacccattgttacgcgcaat
acgccgctgcaggaattgccatttgacgaggcttatagcttcactttgccagccaataca
ttcgtagatgttgatactggcgatagcttgacgcttagcgcgagtgttgcaggcggcgga
gagttgccggattggttgagctttgatgcggcgactggcacattctctggcacaccgaca
acaacggatggcggcggcgtacgcgtcgttgtaactgccacagatagttcgggtgaatca
gtcagcacgaatgtcacatttgcagttggcagcggcgtgatcctcggcacagaagaggac
aatgacctggtcggcacaagtggcgcagatacgttctttggcttggagggcaatgaccgt
atggaaggcctcggcggtaatgatacctacgtgatcgagatcggcgacgggaatgacatc
attgatgacaatggctttaacggcgttgatacggtcatctttaatggccgcactctgggc
gaagccacgatcacgcgggacggagcgtctaacacgatcacatttaatttcgacaatggc
gacagcgtcgaattggttgaagctctagatccaagtttcggagatattgaaagcgttgtc
tttgacgatgcgacactggacaatgcggcgctgcgcgctctggtcattgatacgtttacg
acagtcggtggtgacatcatcttcgggacggaatttgcagatgcctttgaaggcggaacg
ggcaatgaccgcatggaaggtggttcgggcaatgatacctacactttcaacattggggat
ggtcaagacatcgttgatgacggcggcttcaacggcgttgatacgctggtgtttaacggt
cgcgacctagacgacgccacgtttacacgggacggcggctctaacacgttcaccatcaca
tttgacaacggcgatagcgtgcaagtgatcgacggactggacccgagctttggcgatatt
gaaagtgttgtctttgataatacgacacttgatgctgcaggattgcgtgctgtcattctc
gacaccctttcaacggacggagatgatttcattatcggaacggagtttggtgatacgctg
acaggtggccttggcaatgaccgtatcgaaggtaattcaggcaatgacacttatatcttc
aacattggtgacggccaagacatcgtcgatgacggtgggtttaacggccttgataccctc
caattcaacggccgcgcctcaacggaagcgatgttcagccgcgatggtggatcaaatacg
atcacgatcagtttcgcgaatggcgatagcgtcgaagtcattggtgggctggacaacaac
ttcggtgatattgagcaagtcgtgtttagcgacggcactttgaccgatgttcaattccgc
gagttgatctttgattatttctcaactgatggggatgacgttgtctttggcacagagttc
aatgacacgctggaaggtggccttggcaatgatacgctggaaggtctgtcaggcaacgac
acctatgtgtttaatgtcggcgatggccaagacacggtcgatgataatggctttggcggc
gtcgacacgatccgctttgaaggccgcgaactcgcggatgcaacattcgaccgtccagat
gcaacagagactgtgacgatcagctttgccaatggcgatgttgtgacaatcgtcgatgga
ctggaaggctcaacaggcacgattgagacgattgaatttgttaatcctgacggaacagtc
gagacgctcgataacgcagctttccaagccgccgttttggcggggcaaatcacgacgggc
gatgacagtgtttacggttcaggtgcggctgaaacaatcgaagctggcacaggcaatgac
atgctctttggcggcgccggtggggacacttacgtgttcaacattggcgacgggcaagac
acgattgatgacaatgcttttggtgggtctgatcaagcggtatttgtcggcagaacgctg
gcggacgccacctttactcggatcggcacctcgaatgacctgctgatcagctttaacaat
ggcgacacagtcgagatcgtcaacggtctgtccacgacattccgtcggatcgagacattg
gtgtttgacggtattcctgtcttgatcgaagatattgagctgactgtcctgccaatcatc
ggcacggatgcaggggaaactctgcgcggcacagttgatgacgacaccctgatcgcagga
ctcggcgatgatttcatcgaaggtcgtgcgggcgaagatgtctatcaatttagcgctggc
gacggtgctgatcgtgttgaggacaatgggcagacaggcgaaacggatacgcttgaattc
cgagattacgatcagagcgatgcgtccttcctccgtcagggtccgaacacggttctaatc
gagttcggcaatggcgacagtgtgcgggtgcagaacggacttaccactggcagagatgaa
atcgagcaatatgctttccgcgatcagacaatcacggttcaggatgtgcgcgatatttta
gcgtcactgcaaggcacgtcaggtgatgacgcgatcgtaggacaagccgcagatgaaatc
tttgaaggctttgccggcgaggacgtcattgatggtgcgggcggcgatgactttatcgac
ggcggcgaaggcaatgacacgctcatcggcggcacgggcaatgatactttgcgcggcggc
gacggggctgacacatatcagttcgcgtctggcgatggatctgacgtgctgcaaacgcaa
ttcggaacggctgatgctgaccgtctcgtcttcacagattacgatctggctgacgctaca
tttgcgcaaggcgatgctgcggaattccagacgaatgacctggttgtatctttcgccaat
ggcgatcaagtgcgtatccaagggttcttcgaagattctatcgcgtttgacgcaatcgaa
tttgccaatgataccgtcacgcgcagtgacgtattggcccaactgatcgcagaccagcaa
acggatgggaacgatatcattgtcggctttagcagcgatgacacctttgatggtggcctc
ggcgatgacgaaatttcgggtaatggcggcgatgacatctatctttataatgcaggtgac
ggagccgacctgatatttgaaaccttcggcaatgacacaattaacttcggcaccctcaat
gctgcggatgccgttgtgaccaatggtctagaaggtattcgagttgatttcggtggcggt
gatagcgtgacaatcgctgcgcctcgcccgttcggtgacggcgagtctccagacttcggg
attgttgagagctttgtctttgcggacggcacactggatctggaaggattgctcgacctc
gttgagccgcccgcagaaggcattgttgtcgtcgggactaatgaaggcgaaactctgctt
ggcacagatttgtcagatacgcttacgggcgcaggtggcaatgatacgatacgcggtggt
ttgggtgacgatacctatatctataacgtcggcgatgggtttgacttcatcgatgatgct
ggcggaaatgatacgctggttctgaacggtatcacgccagatgatgtgttcgcgctctca
ggcgttttcgtcgttgatccagagctagacgggccgctaatgccgccctcgagcatactc
gatattcgcggcatcgacgcaccaagcggcggcgtggaattcattctcgacagcatcgag
acattcgtcttcgtgccagatgtgaataatccagaccggacgatcatcctgacctatgaa
gaactcttcggtggtgatggcggtccaggcttcccgggtggtccaatcccagtcggcgaa
gtaatcgaagatacagatttattcgtctaa
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integrated database retrieval system