Limnohabitans sp. DCL3: ACHEXK_03260
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Entry
ACHEXK_03260 CDS
T11631
Name
(GenBank) Rne/Rng family ribonuclease
Organism
lik Limnohabitans sp. DCL3
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GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Anti-TRAP
dnstrm_HI1420
Motif
Other DBs
NCBI-ProteinID:
XOZ83005
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Position
complement(736392..739439)
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AA seq
1015 aa
AA seq
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MKRMLINATQAEERRLAIVDGQKLLDYEIEIEGREQRKGNIYQAVVTRVEPSLEACFVDY
GEDRHGFLPFKEISRQYFAEGVSVSQARIQDVIKEGQSLLVQVEKEERGNKGAALTTFVS
LAGRYVVLMPNNPRGGGVSRRIEGDDRAELKEAMDQLEYPKGMSIIARTAGIGRSAPELQ
WDLNYLLKLWTAIDGASKGGKGAFLIYQESSLVIRAIRDYFNNDIGDILIDTDDIYDQAQ
QFMSHVMPEFAPRVKRYRDDAPLFSRFQIEHQIESAYARTVQLPSGGAIVIDHTEALVSV
DVNSARAIKGGDIEETATRTNLEAADEVARQMRLRDLGGLIVIDFIDMEESKNRREVENR
LRDALRQDRARVQFGTISKFGLMEMSRQRLKPALSEGASIPCPRCGGAGHIRDTESSALQ
ILRIIQEESMKDNSAAVHAQVPVEVASFLLNEKRSEIAKIELQQRINVLLVPNKSLETPH
YKLERLKHDDPRLDRIEASYKMAEEIEDATTVTRRSQEPTNKQTPVIKGVLPDAPAPIAP
VKPEAPVAVAKPARQAAAPAPQTSVPTAAATGGFFGWLKNLFGGSTPEAAPAATGKKDEK
IRDVRNGERRSDTREGTRDGERREGGRDGRRGGRRGDRAEGAAGEVRAPREAGGRRAEGR
ADNRQEGRQEVRDGEARPVRAERSERSDRPAGERAPREGRRDGRSEGRHEARNDSKNEGR
SETAPELTAEGTEVRQERAPRGEGRRERGERSSEGRRERGERSERSGDRGGDSRQGDATG
VDANTAASEVVAAEGQTAETASLEQTGERRERRSRDRYGRDRRERGSDNRAENAVEAAQS
EANDPATATAAVPQPDDQPAPRSYFERAQQAAAQTAVARAETPVAETADVPAPAQAMDTL
VAAETAAPVAAQAPEVIAEKPAQVPAETVAATPAVMPAAEKYTLQIDRLQQVAQGSGLVW
VNSDADKVAAVQAAIAAEPQPVRVPRERAPAVVLNEGPLVLVETRKDLKDMNLPF
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgaaacggatgctgatcaacgccacgcaagctgaagagcgccgcttggccatcgtcgac
gggcaaaaactcctcgactacgaaatcgaaattgagggccgcgaacaacgcaagggcaac
atctaccaagcggtggtgacccgagtcgagccctcactcgaggcctgctttgtggactac
ggcgaagaccgccacggttttttgcccttcaaagaaatttcgcgccaatactttgctgaa
ggcgtgtccgtcagccaagcgcgtattcaagacgtcatcaaagaaggccagtccctcttg
gtgcaagtcgaaaaagaagagcgcggtaacaaaggtgcagcactgaccaccttcgtcagc
ttggctggccgctacgtggtgctcatgcccaacaatccccgaggtggtggcgtcagccgc
cgcatcgagggcgatgaccgggccgagctcaaagaagccatggaccagctcgagtacccc
aagggcatgtccatcattgcccgcaccgcaggcattggtcgctccgcgcccgagttgcag
tgggacctgaactacctgctcaaactctggaccgccatcgatggcgcctccaaaggcggc
aagggtgccttcctgatttaccaagaatcgtcgctggtcatccgcgcgattcgcgactac
ttcaacaacgacatcggcgacatcctgatcgacaccgacgacatctatgaccaggctcag
cagttcatgagccatgtcatgccggagttcgcgccccgtgtgaaacgttaccgcgacgac
gcgccactgttcagccgctttcagattgagcaccagatcgagtcggcttacgcgcgcact
gtgcaactgccgtctggcggcgccatcgtgatcgaccacaccgaagccttggtgtcggtg
gacgtgaactcggcccgcgccatcaaaggcggcgacatcgaagaaactgcaacccgcacc
aacctcgaagccgctgacgaagtggcccgtcagatgcgcctgcgcgatctgggtggcctg
atcgtgatcgacttcattgacatggaagagtccaagaaccgccgcgaagtggaaaaccgc
ctgcgcgacgcgctgcgccaggaccgcgcacgcgtccagttcggcaccatcagcaagttc
ggcctcatggaaatgagccgccagcgcttgaagcctgccctgtccgaaggtgcctccatc
ccctgcccccgttgcggtggtgcgggccacatccgtgacaccgaaagctcggcactgcag
atcctgcgcatcatccaagaagagtccatgaaggacaacagcgccgccgtgcacgcccaa
gtgccggtcgaagtcgcctcgttcctgctgaatgaaaagcgctccgagatcgccaagatc
gagctgcagcagcgcatcaacgtgcttctggtgcccaacaagtcgctggaaaccccgcac
tacaaactcgagcgtttgaagcacgatgacccacgtctggaccgcatcgaagccagttac
aaaatggccgaagagatcgaagacgccaccaccgtgacacgccgctcacaagagcccacc
aacaagcaaacgccggtcatcaaaggtgtgttgcccgatgcaccagcgccgattgcgccg
gtcaagcccgaagccccggtggccgtcgccaaacccgcgcgccaggccgctgcccccgca
ccccaaacctcggtgcccactgcggcagcaacgggtggtttctttggctggctgaagaat
ctgttcggtggcagtacccctgaagctgctcctgctgcgacgggtaaaaaagatgaaaaa
atccgcgacgtgcgcaacggcgagcgccgcagtgacacccgtgagggcacgcgcgatggt
gagcgccgtgaaggcggccgtgatggccgccgcggtggacgccgtggtgatcgcgctgaa
ggcgctgcaggtgaagttcgtgcaccacgcgaagcaggtggacgccgagctgaaggccgt
gcagacaaccggcaagaaggtcgccaagaggtgcgcgatggcgaggcccgcccagtacgc
gcagaacggagcgaacgctcagatcgcccagcgggcgaacgtgcgcctcgggaaggtcga
cgcgatggccgcagcgaaggtcgccatgaggcccgcaacgacagcaaaaacgaaggccgc
agcgaaaccgcaccggagttgacggcagaaggcaccgaagtccgccaagaacgtgcgcca
cgtggtgaaggccgtcgtgaacgcggcgagcgcagcagcgaaggtcgtcgtgagcgtggc
gaacgcagcgaacgaagtggggaccgcggtggcgacagccgccagggcgacgccactggc
gtcgatgccaacaccgctgcaagcgaagtggtcgccgcagaaggacagaccgcagaaact
gcgagcttggagcagacaggcgagcgccgtgagcgccgctcgcgtgaccgttacggccgt
gaccgccgtgagcgtggcagcgataaccgtgcggaaaacgctgtcgaagccgcccaaagc
gaggcgaatgacccagcaacggccaccgcagcagtgcctcagcccgatgaccagcccgct
ccacgttcttactttgaacgtgcccagcaagccgcagcacaaacggctgtggctcgcgct
gaaacacctgtggctgagacagccgatgtgcctgcgcctgcacaggccatggacacgctt
gtggccgccgaaactgcagcacccgttgctgcccaggcgcccgaggtgatcgcagaaaaa
cctgctcaagtgcccgctgaaactgtcgcggcaacgcctgcggtcatgcctgctgcagag
aaatacaccctgcaaatcgatcgtttgcagcaagtggcacaaggctctggcctggtttgg
gtcaactccgatgccgacaaagtggcagcggttcaagcggccattgccgccgaaccccaa
ccagtccgcgttccccgtgagcgtgcgcctgctgtggtgctgaacgagggtcccttggtc
ttggtcgaaacacgcaaagacctgaaagacatgaacctgccattctga
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