Limnohabitans sp. DCL3: ACHEXK_10015
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Entry
ACHEXK_10015 CDS
T11631
Name
(GenBank) autotransporter-associated beta strand repeat-containing protein
Organism
lik Limnohabitans sp. DCL3
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PATR
TPS
Motif
Other DBs
NCBI-ProteinID:
XOZ81341
LinkDB
All DBs
Position
2181376..2190381
Genome browser
AA seq
3001 aa
AA seq
DB search
MTPHLPQPMPTIRGFGAGSRNNNSAFTARLRPVALAAALLSAYTHLSALADLPRGAQLRF
GQAQVQTTAPGQMTISQSSARAGLDWQSFSIGSGQSVLVQQPSANSVLVNRVVGSDPSLI
LGSLRANGSVWLLNPSGIVFGANAQVNVGGLVASTLVVRDGLQSGRLVLERGPNGAAALV
ADGTITAPNGTVVLAAPQLTVGPQAQIQAQRVGLAAATHVSVDVEGDGLMLFNVSNDGNL
DTRLNLLGNASASAGGSVEARAAARAGFADTVLNLEGVVRARSLSTRQGQIVIDGGAAGT
TRVAGHVDASGTNTDERGGQVQVLGQHIRLDTGANINASGPAGGGTVLVGGDWQGSGNLP
QATTVTMQAGTHIDASATLQGDGGKVVLWSDVHNASSQTTIAGSINAEGHGNLSIGGQIE
TSSAKLRISDSARVRMGGQGSTGGLWLLDPTDFTIAASGGDITGATLAGSITANTTVEVL
NTQGASGTSGNIHLNDTVSWANTGVLKLTAAGGVVGTTGAIDMTGAGGLVVNQAGTTSFS
GVISGTGGVTKTGSGTLTLSGPNTYSGATTVSAGTLSIAADTALGTAPVTATAGHLTLDG
GTLAITADMTLSDKRGLSLGSGNGTLDVASGKTLSYAGIAAGTGGVTKTGSGTLTLSGPN
TYSGATTVSGGTLQVGNGSTSGTLGAGAVTNNSTLIFNRSDALTVTNEISGSGDLTKTGS
GTLTLSGPNTYSGSTTINAGTLAITHNNALGTTAAGTTVASGATLDLQSVTVGAEAITLN
GGTLATSFGASSIFGTVTLGANADFSVTGNSLNMTGAVNGPYALTVTGSGALTLAGGVGQ
TTVLTSLAIAAPVTLASNVTTSGTQSYTGAVTLSGGNRTLTTTNSNITFSSNSTINSLDA
TARNLTLAMGTGTATFGGAVGATNALGAIDITGALDLNAGITSAASLSVSGSSDLGANVT
TSGAQTYSGAVTLSGGNRTLTTTDSNITFSNTVDSANPTARALTLAMGTGTATFGGAVGA
TNALGAIDITGALDLNAGITSAASLSVSGSSDLGANVTTSGAQTYSGAVTLSGGNRTLTT
TDSNITFSNTVDSANPTARALTLAMGTGTATFGGAVGATNALGAIDITGALDLNAGITSA
ASLSVSGSSDLGANVTTSGAQTYSGAVTLSGGNRTLTTTDSNITFSNTVDSANPTARALT
LAMGTGTATFGGAVGATNALGAIDITGALDLNAGITSAASLSVSGSSDLGANVTTSGAQT
YSGAVTLSGGNRTLTTTDSNITFSNTVDSANPTARALTLAMGTGTATFGGAVGATNALGA
IDITGALDLNAGITSAASLSVSGSSDLGANVTTSGAQTYSGAVTLSGGNRTLTTTDSNIT
FSNTVDSANPTARALTLAMGTGTATFGGAVGATNALGAIDITGALDLNAGITSAASLSVS
GSSDLGANVTTSGAQTYSGAVTLSGGNRTLTTTDSNITFSNTVDSANPTARALTLAMGTG
TATFGGAVGATNALGAIDITGALDLNADITSAASLSVSGTTDLGANVTTSGTQSYTGAVT
LSGGNRTLTTTDSNITFSNTVDSANPTARALTLAMGTGTATFGGAVGATNALGAIDITGA
LDLNADITSAASLSVSGTTDLGANVTTSGTQSYTGAVTLSGGNRTLTTTDSNITFSNTVD
SANPTARALTLAMGTGTATFGGAVGATNALGAIDITGALDLNADITSAASLSVSGTTDLG
ANVTTSGTQSYTGAVTLSGGNRTLTTTDSNITFSNTVDSANPTARALTLAMGTGTATFGG
AVGATNALGAIDITGALDLNADITSAASLSVSGTTDLGANVTTSGTQSYTGAVTLSGGNR
TLTTTDSNITFSNTVDSANPTARALTLAMGTGTATFGGAVGATNALGAIDITGALDLNAD
ITSAASLSVSGTTDLGANVTTSGTQSYTGAVTLSGGNRTLTTTDSNITFSSNSTINSLDA
TARALTLAMGTGTATFGGAVGATNALGAIDITGALDLNAGITSAASLSVSGSSDLGANVT
TSGTQSYTGAVTLSGGNRTLTTTDSNITFSSNSTINSLDATARALTLAMGTGTATFGGAV
GATNALGAIDITGALDLNAGITSAASLSVSGSSDLGANVTTSGTQSYTGAVTVSADSIVT
GSHITMQALALESGGFGHQLSVANTDTASAITSVISGAGGLTKTGAGTLTLSGNNTYTGG
TTISGGILALATSGTIAASSGVTIHNAGTFSIAGDKTLKSLSSASTSAMTSLGSFTLTVG
DASDTLSTVSTYAGAISGTGGLTKTGAGTLTLLGNNAYAGTTTVSRGTLQVGNGSTSGTL
GTGAVINNATLTFNRSDALTVANEISGSGDLTKTGSGTLTLSGPNTYSGATTVNAGTLVL
TGALNNASHVNLNGTSVWDLRTTQTVASLNMASGTSITNGAGTSALTVTGTSTLANRINT
SGTQTYRSAVTLGADVTLTASTVNTESTLAGSNHALAIVGAANIGGAYTGLSSLNVSGAS
TLGANISTTGTQTYAGAVTLSGADRSLTGSTVNTQSTLAGGGHALAIVGAANIGGAYTGL
SSLNVSGASTLGADVSTTGTQTYQGAVTLINGGRTLTGSAITANNAGNLWGSVLSLTATD
AVNISGGNGPLTLGSVTAGAGGSIRAGTVHLNDQMTVSSGTLTLLASADASGNTTSSNKL
SPTQTSVHYSADVVTQGTNGKIDLLQGARLVVLAPGNSANGGVGVGGSVALTHADNSFAG
ELEILSGAANATWSAHLGNGQSVQGRVQVNGSGVRIGGAGIEADIVSVRANQLSTLGHAV
ITARMPFNNVMEASATVPGLTLALAPAAFSLASPFGRTGAEIAVNVGYGSSFNTGLVSAL
PQNGAQGATAVVLKGPTVGNGYTFYSTNAGIQSEIPVYYNGLMPSTPEVSGAISATISVI
ENARRQGFEEALRTENVATRLRSGVIAEVGPGRSATTGSQGIALPELCDPEVTWDCKGEE
K
NT seq
9006 nt
NT seq
+upstream
nt +downstream
nt
atgacaccccatctgccacagcccatgccaaccatccggggctttggcgcagggtccaga
aacaacaacagcgcgttcacagcccggctcaggccggtggctttggccgccgctctgctc
tcggcttatacacacttgagtgccttggccgatttgccgcggggcgcacagctgagattt
ggccaagcccaagtacaaaccaccgcccccggccaaatgaccatttcgcaatccagcgcg
cgcgccgggctggactggcagagtttctcgattggcagcggccaaagcgtgttggtccag
caacccagtgccaattcggtattggtcaaccgcgtggtgggcagtgacccttcgctcatc
ttgggcagtctgcgcgccaacggcagcgtctggctgctcaaccccagcggcattgtgttc
ggtgccaacgctcaggtgaatgtgggcgggcttgtggccagcaccctcgtggtgcgcgat
gggctccagtcagggcgtcttgtgctggagcgcggccccaacggtgccgcagcgctggtc
gccgatggcaccatcacggcccccaacggcacggtggtgctggcggcaccgcaactcacg
gtcggcccgcaggcccagatccaggcccagcgcgtgggtttggctgcagccacccacgtc
agcgtcgatgtggagggcgatggtctgatgctcttcaacgtcagcaacgacggcaacttg
gacacacgcctgaacttgctgggcaatgccagtgcctccgccggcggcagcgtggaggcc
cgtgccgcagcgcgcgccggttttgccgacacggtgttgaacctggaaggggtggtgcgt
gcccgcagtctgagcacgcgccaggggcagatcgtcatcgatggcggcgcagcaggcacc
acccgcgtggcaggccatgtggatgccagcggcaccaacaccgacgaacgcggcggccag
gtgcaggtgctgggccaacacatcaggctcgataccggcgccaacatcaacgcatctggc
ccggccggtggcggcacggtgctggtgggcggcgactggcaaggcagcggcaacctaccc
caggccaccacggtcaccatgcaggcaggcacccacatcgacgccagcgccactttgcag
ggcgatggcggcaaggtggtgctgtggagtgatgtgcacaatgccagcagccaaaccacc
atcgcaggcagcatcaacgccgaagggcatggcaacctgtcgatcggtggccagattgaa
acgtccagcgcaaaacttcgtatctcggacagcgcccgtgtccgcatgggtggccaaggc
tccacaggtggcctctggctgctcgaccccaccgacttcaccatcgccgcctcgggcggt
gacatcacaggcgctacactggctggctcgatcaccgcaaacactaccgtggaggtgctc
aacacgcaaggggccagcggcacatcaggcaatatccatctcaacgacacggtgagctgg
gccaacaccggtgtgctcaagctcaccgccgcaggcggcgtggtaggaacgacaggtgcc
atcgacatgacaggcgccggcggcctggtcgtcaaccaggccggcaccacgtctttctcc
ggtgtcatctccggtaccggaggcgtaaccaagaccggctcaggcaccctcactctctct
ggccccaacacctactccggcgcaaccaccgtcagcgccggcactctttcgatcgcagcc
gacaccgctctgggtaccgcccccgtcaccgccaccgccggccacctcacgctcgacggc
ggtacgctggccatcaccgccgacatgacgctgtcagataagcgtgggctttcgctgggc
tcgggcaacggcacgctcgacgtggccagcggcaagaccttgagctacgcaggcatcgcc
gccggtaccggaggcgtaaccaagaccggctcaggcaccctcactctctctggccccaac
acctactccggcgcaaccaccgtctccgggggcaccttgcaggtaggcaacggcagcacc
agcggcacgctgggcgcaggtgcagtcaccaacaacagcaccctgattttcaaccgcagt
gatgctctcactgtgaccaacgaaatctcaggctccggcgatctgaccaagaccggctct
ggcaccctcaccctctctggccccaacacctactccggctccaccaccatcaacgccggc
accctggccatcacacacaacaacgcattgggcaccaccgctgccggaaccaccgtcgcc
agtggtgccacactggacctgcaaagtgtgacagtcggcgcagaagccatcaccctcaac
ggcggtacgctggccacctcttttggtgcctccagcatttttggcaccgtgaccctgggc
gccaacgccgatttcagcgttaccggcaactctttgaacatgaccggcgctgtcaacggg
ccctacgccctgaccgtgactggatctggtgccttgacactggcgggtggcgtgggccaa
accaccgttttgaccagcctggctattgcggcaccggtgacattggcatccaacgtcacc
acctccggcacccagtcctacaccggcgctgtgaccttgagcggtggcaaccgcacgctg
accaccaccaacagcaacatcactttcagcagcaacagcaccatcaacagtttggacgcc
accgcccgcaacctgacgctggccatgggcaccggcaccgccaccttcggtggtgctgtc
ggcgccaccaacgccctgggtgccatcgacatcaccggcgcactagacctcaatgcaggc
atcacttcggccgcctctttgtccgtctccggctcctccgacctgggcgccaacgtcacc
acctccggcgcacaaacctattcaggcgctgtcaccttgagcggtggcaaccgcacgctg
accaccaccgacagcaacatcactttcagcaacaccgttgactcggccaatcccaccgcc
cgcgccctgacgctggccatgggcaccggcaccgccaccttcggtggtgctgtcggcgcc
accaacgccctgggtgccatcgacatcaccggcgcactagacctcaatgcaggcatcact
tcggccgcctctttgtccgtctccggctcctccgacctgggcgccaacgtcaccacctcc
ggcgcacaaacctattcaggcgctgtcaccttgagcggtggcaaccgcacgctgaccacc
accgacagcaacatcactttcagcaacaccgttgactcggccaatcccaccgcccgcgcc
ctgacgctggccatgggcaccggcaccgccaccttcggtggtgctgtcggcgccaccaac
gccctgggtgccatcgacatcaccggcgcactagacctcaatgcaggcatcacttcggcc
gcctctttgtccgtctccggctcctccgacctgggcgccaacgtcaccacctccggcgca
caaacctattcaggcgctgtcaccttgagcggtggcaaccgcacgctgaccaccaccgac
agcaacatcactttcagcaacaccgttgactcggccaatcccaccgcccgcgccctgacg
ctggccatgggcaccggcaccgccaccttcggtggcgctgtcggcgccaccaacgccctg
ggtgccatcgacatcaccggcgcactagacctcaatgcaggcatcacttcggccgcctct
ttgtccgtctccggctcctccgacctgggcgccaacgtcaccacctccggcgcacaaacc
tattcaggcgctgtcaccttgagcggtggcaaccgcacgctgaccaccaccgacagcaac
atcactttcagcaacaccgttgactcggccaatcccaccgcccgcgccctgacgctggcc
atgggcaccggcaccgccaccttcggtggtgctgtcggcgccaccaacgccctgggtgcc
atcgacatcaccggcgcactagacctcaatgcaggcatcacttcggccgcctctttgtcc
gtctccggctcctccgacctgggcgccaacgtcaccacctccggcgcacaaacctattca
ggcgctgtcaccttgagcggtggcaaccgcacgctgaccaccaccgacagcaacatcact
ttcagcaacaccgttgactcggccaatcccaccgcccgcgccctgacgctggccatgggc
accggcaccgccaccttcggtggcgctgtcggcgccaccaacgccctgggtgccatcgac
atcaccggcgcactagacctcaatgcaggcatcacttcggccgcctctttgtccgtctcc
ggctcctccgacctgggcgccaacgtcaccacctccggcgcacaaacctattcaggcgct
gtcaccttgagcggtggcaaccgcacgctgaccaccaccgacagcaacatcactttcagc
aacaccgttgactcggccaatcccaccgcccgcgccctgacgctggccatgggcaccggc
accgccaccttcggtggcgctgtcggcgccaccaacgccctgggtgccatcgacatcacc
ggcgcactagacctcaatgcagacatcacttcggccgcctctttgtccgtctccggcacg
accgacctgggcgccaacgtcaccacctccggcacccagtcctacaccggcgctgtgacc
ttgagcggtggcaaccgcacgctgaccaccaccgacagcaacatcactttcagcaacacc
gttgactcggccaatcccaccgcccgcgccctgacgctggccatgggcaccggcaccgcc
accttcggtggcgctgtcggcgccaccaacgccctgggtgccatcgacatcaccggcgca
ctagacctcaatgcagacatcacttcggccgcctctttgtccgtctccggcacgaccgac
ctgggcgccaacgtcaccacctccggcacccagtcctacaccggcgctgtgaccttgagc
ggtggcaaccgcacgctgaccaccaccgacagcaacatcactttcagcaacaccgttgac
tcggccaatcccaccgcccgcgccctgacgctggccatgggcaccggcaccgccaccttc
ggtggcgctgtcggcgccaccaacgccctgggtgccatcgacatcaccggcgcactagac
ctcaatgcagacatcacttcggccgcctctttgtccgtctccggcacgaccgacctgggc
gccaacgtcaccacctccggcacccagtcctacaccggcgctgtgaccttgagcggtggc
aaccgcacgctgaccaccaccgacagcaacatcactttcagcaacaccgttgactcggcc
aatcccaccgcccgcgccctgacgctggccatgggcaccggcaccgccaccttcggtggc
gctgtcggcgccaccaacgccctgggtgccatcgacatcaccggcgcactagacctcaat
gcagacatcacttcggccgcctctttgtccgtctccggcacgaccgacctgggcgccaac
gtcaccacctccggcacccagtcctacaccggcgctgtgaccttgagcggtggcaaccgc
acgctgaccaccaccgacagcaacatcactttcagcaacaccgttgactcggccaatccc
accgcccgcgccctgacgctggccatgggcaccggcaccgccaccttcggtggcgctgtc
ggcgccaccaacgccctgggtgccatcgacatcaccggcgcactagacctcaatgcagac
atcacttcggccgcctctttgtccgtctccggcacgaccgacctgggcgccaacgtcacc
acctccggcacccagtcctacaccggcgctgtgaccttgagcggtggcaaccgcacgctg
accaccaccgacagcaacatcactttcagcagcaacagcaccatcaacagtttggacgcc
accgcccgcgccctgacgctggccatgggcaccggcaccgccaccttcggtggtgctgtc
ggcgccaccaacgccctgggtgccatcgacatcaccggcgcactagacctcaatgcaggc
atcacttcggccgcctctttgtccgtctccggctcctccgacctgggcgccaacgtcacc
acctccggcacccagtcctacaccggcgctgtgaccttgagcggtggcaaccgcacgctg
accaccaccgacagcaacatcactttcagcagcaacagcaccatcaacagtttggacgcc
accgcccgcgccctgacgctggccatgggcaccggcaccgccaccttcggtggtgctgtc
ggcgccaccaacgccctgggtgccatcgacatcaccggcgcactagacctcaatgcaggc
atcacttcggccgcctctttgtccgtctccggctcctccgacctgggcgccaacgtcacc
acctccggcacccagtcctacaccggcgctgtcactgtttctgctgacagcatcgtgacc
ggctcgcacatcaccatgcaggcgttggcattggagtcgggcggttttgggcatcagctg
tcggtggccaacaccgacaccgcctcagccatcacaagcgtgatcagtggtgcaggtggc
ctgaccaagaccggcgctggcaccctcaccctctcggggaacaacacctacaccggtggc
accaccatctccgggggcatattggcactggccacctcgggcacgattgccgccagctca
ggggtcaccatccacaacgcgggcaccttctccattgcaggggacaagaccctcaaatct
ctcagcagtgccagcacctcggctatgaccagcctgggcagcttcaccctgacggttggc
gatgccagcgacaccttgagcaccgtgagcacttatgccggtgccatcagcggcaccggt
ggcctgaccaagaccggcgcaggcacactcaccctcttgggcaacaacgcctacgccggc
accaccactgtctccaggggcaccctgcaggtaggcaacggcagcaccagcggcacgctg
ggaacaggtgcagtcatcaacaacgcaaccctcactttcaaccgcagtgatgcactcact
gtggccaacgagatctcaggctccggcgatctgaccaagaccggctctggcaccctcact
ctctctggccccaacacctactccggcgcaaccaccgtcaatgcaggcactttggtgctg
acgggagcactgaacaatgcaagccatgtcaatttgaacgggacatcggtgtgggatctg
cgcacaactcaaaccgtggccagcctgaacatggccagcggcacaagcatcacgaatggc
gcaggcacatcggctttaacggtcacgggcacttcgactttggccaaccgcatcaacact
tccggcacccaaacctacaggagtgcagtcacactgggcgcagacgtgacgctgaccgcc
agcacagtcaacaccgaaagcaccctggcgggcagcaaccacgccctggccatcgtcggc
gcagccaacatcggcggtgcctacacgggcttgagcagcctgaacgtctccggtgcctcc
accctcggcgccaacatcagcaccaccggcacccaaacctatgcgggtgccgtgactttg
agcggtgctgaccgcagcttgaccggcagcacggtcaacacccaaagcaccctggctggc
ggcggccacgcactggccatcgtcggtgccgccaacatcggcggtgcctacacgggcctg
agcagcctgaacgtctcgggcgcctccaccctcggcgccgacgtcagcaccacgggcacg
caaacctaccaaggtgcggtgaccttgatcaacggtggcaggacgctgacaggaagcgcc
atcaccgcaaacaatgcgggcaacctttggggttccgttttgtctttgacagcaacggac
gccgtcaacatctccggaggcaacggtccattgaccctgggttcagtgactgcaggcgca
ggcggcagcatccgtgctggcacggtgcatttgaatgaccaaatgacggtttcaagcggt
acgctgactttgttggccagcgcagatgcttctggcaacacaacgagcagcaacaagctg
agccccacacaaacttccgttcactacagcgccgacgtggtgacacaaggcaccaacggc
aaaatcgatctcttacaaggcgcccgcctggtggttctggccccgggcaactcggccaac
ggtggcgttggcgttggcggcagcgtcgccctgacccacgcggacaacagctttgccggt
gagctggaaattctcagtggtgcggccaatgccacctggtcagctcaccttggcaatggt
caatcggttcagggcagggtgcaggtcaacggctctggggtgcgcattgggggcgcaggc
atcgaagcggacatcgtctctgtgcgcgccaaccagttgtccaccctgggccatgccgtg
atcaccgcccgcatgcctttcaacaacgtgatggaggccagcgccacggtgccggggctg
accctggcgctggcacctgccgctttttctctcgcttcgccgtttggccgcacaggtgcc
gaaatcgcggtcaatgtgggctacggctcctcgttcaatacgggcctggtcagcgcgctg
cctcaaaacggtgcccagggtgccaccgctgtggtcttgaagggcccgaccgtaggcaat
ggctacaccttctattccaccaatgccggcatccaaagcgagattccggtgtattacaac
ggcttgatgccttccacgcccgaagtttcgggtgcgatttcggccaccatctcggtgatc
gaaaacgcccgcaggcaaggcttcgaggaagccctgcgcaccgaaaacgtggcgacccgg
ctgcgctcgggtgtgattgccgaagtgggcccagggcgctctgcaacgacgggctcgcaa
ggcatcgccctgccagagctatgcgatcccgaagttacctgggattgcaaaggagaggag
aagtga
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