Leptospira interrogans serovar Lai 56601: LA_0947
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Entry
LA_0947 CDS
T00098
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
lil
Leptospira interrogans serovar Lai 56601
Pathway
lil03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LA_0947 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lil03019
]
LA_0947 (pnp)
03016 Transfer RNA biogenesis [BR:
lil03016
]
LA_0947 (pnp)
Enzymes [BR:
lil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LA_0947 (pnp)
Messenger RNA biogenesis [BR:
lil03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LA_0947 (pnp)
Transfer RNA biogenesis [BR:
lil03016
]
Prokaryotic type
tRNA degradation factors
LA_0947 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
TAtT
OB_RRP5_4th
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
AAN48146
UniProt:
Q8F7J8
LinkDB
All DBs
Position
I:941479..943575
Genome browser
AA seq
698 aa
AA seq
DB search
MTHTISGQYGRDTIVLETGSWAKQAHGAVVYKSGNLVLLATVCAADEAKEGQDFFPLTCE
YTEKLYSVGRFPGGYFKREAKPPEHEILISRIIDRPIRPLFPEGYFCEVQLQVQVLSADG
DVSVAGHALNAASAALAVSDIPFNGPIAGARIGRVNGELILNPTTKEILNSDLDLVVAGT
KTHIVMIEGEAKELSNEEMIAALRFAQKHIAEFVTLQEEYAKKIGVVKREVKLKVRDEEL
LSKVKEYAFAKLTTANQTPDKTARNKEISNVNKEVVEFFKDTIEDSDKIKDIKAYLHELE
YEIVREQVLTKGTRFDGRKLDEIRSISVEINPLPGPHGSAVFTRGQTQSLGVVTLGTGSD
NQRYETLEGQKEKSFMLHYNFPAFSVGEVRRSSGPGRREIGHGNLAERALKLVLPKPDEF
PYVIRVVSEILESNGSSSMASVCSGSLALMAAGVPIQGSVSGIAMGLFSDSSGKYAVLSD
IAGLEDHFGDMDCKIAGTRKGITAFQMDLKVTGVSFDVLESVFEQAQRGRFHILDIMEKH
ISKASSTLAGTAPRIIVRNIPKDRIGELIGPGGKNVRGISELTGAELYIEDDGKVTISGS
NQESAEKAAKMVDGFFAEVEVGKIYEGKVKRIADFGAFVEILPGKEGLCHISKIDFKRVN
SVKDIVKEGDIIRVKVLNVDKTGKIDLSRKDALEEEQV
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgacacacacaatttccggccagtatggccgagatacgatcgttttagaaaccggaagc
tgggcaaaacaagcacacggagccgttgtttataaatctggaaatttagttttacttgct
accgtatgcgctgctgatgaagcaaaagaagggcaggacttttttccacttacttgtgaa
tataccgaaaaactttattcagttggtcgttttcctggtggttattttaaaagagaagcc
aaacccccggaacatgaaattttaatttctagaattatagacaggccaattcgtccctta
tttccagaaggttatttctgcgaagtgcaacttcaagttcaagtactttctgcagatggg
gacgtttctgttgcaggacatgctttaaatgctgcaagcgctgcattagcagtttctgat
attccctttaatggcccaattgcaggcgcaagaattggtagagtcaacggagaattgatt
ctaaatcctactactaaagaaatcttaaattccgatttagatttggtcgttgccggaact
aaaactcacattgtaatgattgagggagaagcaaaagaacttagtaatgaagaaatgatt
gctgctcttcgttttgctcaaaaacatattgcagaatttgtaactcttcaagaagaatat
gcgaaaaaaatcggagtcgtcaaacgcgaagttaaattgaaagttcgggatgaagagctt
ctttctaaggtaaaagaatatgcgtttgcaaaactaactacggctaatcaaactccagat
aaaactgcacgtaataaagaaatttctaatgtaaataaggaagtagtagaatttttcaaa
gatacgattgaagactctgacaagatcaaggatataaaagcatatcttcacgaattggaa
tatgaaattgtaagagaacaagttcttacaaaaggaactcgttttgatggtagaaagtta
gacgaaatccgttctatttccgtggaaatcaatcctcttcccggtcctcatggttctgca
gtttttacgagagggcagactcagtctttgggagttgtgactttagggaccggttctgat
aatcaaagatacgaaactttagaaggtcagaaagaaaaatctttcatgctacattataat
tttcctgcgttttctgtgggggaagttcgtagatcttccggtccaggtagaagggaaatc
ggtcatggaaatctcgcagaacgtgcgttaaaacttgttcttcctaaaccggatgagttt
ccttatgtaatccgggttgtatctgaaattttagaatccaacggctccagttctatggct
tctgtttgttccggttctttggcgcttatggctgcgggtgttccgattcagggaagtgtt
tctggaattgcaatggggcttttttctgattcttccggtaagtatgcagttttatccgat
attgcgggtctggaagaccattttggtgatatggattgtaaaatcgccggaaccagaaaa
ggaattaccgcgtttcaaatggatttgaaagtgactggtgtcagtttcgatgttttggaa
agcgttttcgaacaagcacagagaggtagatttcatattttggatattatggagaaacat
atatccaaggcttcctcgacgttagccggaactgcgcctcgtatcatcgttagaaatatt
cctaaagatagaatcggggaattgatcgggcctggtggcaaaaacgttagagggattagc
gaacttaccggagctgaactttatatagaagacgatggaaaagtgactatctctggttcc
aaccaagagtccgcagaaaaagcggccaaaatggtagatgggttttttgcagaggtagaa
gtaggaaaaatttacgaaggaaaagtaaaacgaatcgccgatttcggtgcatttgtggaa
attcttccaggtaaagaaggcctttgccatatttccaagatcgattttaaaagagtaaat
tcggtcaaagatatagttaaagaaggcgatattattcgagtgaaagttttaaacgtagat
aaaaccggaaaaattgatctttccagaaaagacgctctcgaagaagaacaagtataa
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