Leptospira interrogans serovar Lai 56601: LA_1021
Help
Entry
LA_1021 CDS
T00098
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
lil
Leptospira interrogans serovar Lai 56601
Pathway
lil03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LA_1021 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lil03021
]
LA_1021 (rho)
03019 Messenger RNA biogenesis [BR:
lil03019
]
LA_1021 (rho)
Transcription machinery [BR:
lil03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
LA_1021 (rho)
Messenger RNA biogenesis [BR:
lil03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LA_1021 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_22
NACHT
AAA
AAA_25
OB_RNB
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
AAN48220
UniProt:
Q8F7C5
LinkDB
All DBs
Position
I:complement(1027817..1029265)
Genome browser
AA seq
482 aa
AA seq
DB search
MATARRDNKNRHQHSNHNHNNQNDSGDSFEEESTNQESQEFDSSENSDPRSRKRKRGGYE
GPAPAPIDLVELKKKAISDLIEVAKSLGVENTGGLKKQNLIFAILQAQAERDGQVHAAGV
MEKLPDGYGFLRSPDYNYVPGPDDIYVSPSQIKLFGLRTGDTVEGQIRPPKESERFFAML
RVETVNGYTPDVAGKRALFDNLTPLYPNERLKMEYDPSMLDTRILDLMCPIGKGQRALIV
APPRTGKTILMQNIANAITSNHPECSLIVLLIDERPEEVTDMARHVRGEVVSSTFDEPAQ
RHVQVAEMVIEKAKRLVEHGKDVVILLDSITRLARAYNQVIPTSGKILSGGVDSNALHKP
KRFFGAARNIEEGGSLTIIATALIDTGSKMDEVIFEEFKGTGNMEIHLDRKLSDKRIFPA
IDINKSGTRKEELLITKDVLQKVFVLRKVLSPMSITESMELLLEKMRLSKTNDAFLASMN
TQ
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagcaagacgagacaataaaaacagacaccaacattccaaccacaatcataac
aaccaaaacgattctggagattctttcgaagaagaaagtacaaaccaagaatctcaagaa
tttgattcttccgaaaattcagatcccagatctcgtaaacgcaaacgagggggttacgaa
ggccccgcccctgctcctatcgatctagtagaactgaagaaaaaagcaatttctgatttg
atcgaagtcgccaaaagtttaggagtagaaaataccggcggtttaaaaaagcagaatttg
atctttgccattttacaagcgcaagcggaaagagacggacaagtccacgccgccggtgtt
atggaaaaacttccggacggatatggatttttacgttctccggattacaactacgtgccg
ggtccggatgacatttatgtttctccttctcagatcaaattgttcggtcttagaaccggg
gatacggtagaaggtcaaattcgtcctcccaaagaatcggaacgattttttgccatgctc
cgagtggaaaccgtcaacggttatactccggacgtagccggtaaacgcgccttatttgac
aacttaactcctttatatccaaacgaaagactcaagatggaatacgatccatcgatgctc
gacactagaatcttagatttaatgtgtccaattggaaaaggacaaagggctttgatcgta
gcacctcccagaaccggtaaaacgattttgatgcagaatatcgcaaacgcgattacatcc
aatcatccggaatgttctttaattgtacttctaatcgacgaacgtcccgaagaagtgaca
gacatggcccgtcacgttcggggagaagtagtttcttccacatttgacgaacctgcacaa
agacacgttcaagtcgccgagatggtcatcgaaaaagcaaaacgtctcgtcgaacatgga
aaagacgtggttatacttttagattcgatcactcgtttggctcgggcctacaatcaagtc
attccaacttccggtaaaattctttccggtggagtggactccaatgcacttcataaacca
aaacgattttttggagccgcaagaaacattgaagaaggtggttctctcacgatcatcgcc
actgctttgatagatactggatccaagatggacgaagtaatctttgaagaattcaaagga
actggaaatatggagatccatctggatcggaaactttctgataaacggatcttccctgcg
atcgatattaataaatccggaactcgtaaagaagaactactaattaccaaagacgtcctt
cagaaagtgtttgttctgcgaaaagtactttctcctatgagtatcacggaaagcatggaa
ttattgctggaaaaaatgaggctttctaaaacaaacgacgcctttttagccagtatgaac
acacagtaa
DBGET
integrated database retrieval system
