Leptospira interrogans serovar Lai 56601: LA_2129
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Entry
LA_2129 CDS
T00098
Symbol
ssl2
Name
(GenBank) DNA or RNA helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
lil
Leptospira interrogans serovar Lai 56601
Pathway
lil03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lil00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
LA_2129 (ssl2)
09124 Replication and repair
03420 Nucleotide excision repair
LA_2129 (ssl2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lil03021
]
LA_2129 (ssl2)
03400 DNA repair and recombination proteins [BR:
lil03400
]
LA_2129 (ssl2)
Enzymes [BR:
lil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LA_2129 (ssl2)
Transcription machinery [BR:
lil03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
LA_2129 (ssl2)
DNA repair and recombination proteins [BR:
lil03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
LA_2129 (ssl2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
AAN49328
UniProt:
Q8F4B2
LinkDB
All DBs
Position
I:2098062..2099771
Genome browser
AA seq
569 aa
AA seq
DB search
MSKPLIVQSDRTMLLEVDNPEFEACQSVVSKFAELEKSPEYLHTYRISPLSLWNAASIKM
SADEIVECLEKFSRYSVPKNIVNEIREQISRYGKVKLVKEESGELAILSNEKGFLQEIGN
HRAVQPFIESTFPDKIYIKKEYRGHIKQALIKIGFPVEDLAGYDEGNKYGFNLRPTSISG
KKFGMRDYQRACVEVFHAGGGNEGGSGVVVLPCGAGKTIVGIGVMQIVGAETLILVTNTL
SIRQWRNEILDKTDIPPEDIGEYSGEVKEIRPITIATYNILTHRKKKGGDFTHFHLFGAN
NWGLIVYDEVHLLPAPVFRMTSELQAKRRLGLTATLVREDGLEEDVFSLIGPKKYDVPWK
ELESKSWIAEAKCKEIRVNMEDDLRLKYSIADDREKFRLASENPEKMKAIGLIMKKHSES
HLLVIGQYINQLEEISKKFNIPLITGKTPLPERQTLYDAFRSGKIKSLVVSKVANFSIDL
PDANIAIQVSGTFGSRQEEAQRLGRILRPKGHDNTAVFYSLISRDTNEERFGQNRQLFLT
EQGYEYEIYTLDQFREAQEELAQLQLNNV
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaacccttaatcgttcagagcgacagaaccatgcttttagaggtggataatccg
gaatttgaagcctgtcaaagtgtagtttccaaatttgctgaattggaaaaaagtccggaa
taccttcacacatatagaatttccccactttccctttggaacgccgcatcaatcaaaatg
tctgcggatgaaattgttgaatgtttggaaaaattctccaggtattctgttcccaaaaac
atagtcaacgaaatccgagagcagatcagtcggtacggaaaggtaaaacttgttaaagaa
gaatccggggaactcgcaattctatccaatgaaaaaggatttttacaagaaattggaaat
catagagccgttcaaccgtttatagaatctactttcccagataagatatatatcaaaaaa
gaatatcgtggtcatatcaaacaagctttgatcaagattggttttccagttgaagacctg
gccggttatgacgagggaaataaatacggatttaatttaagacctacgagcatcagtggc
aaaaaatttggaatgcgagattatcagagagcttgtgtggaagtatttcacgctggcgga
ggaaacgaaggtggttctggagttgtagtacttccctgtggcgctggaaaaaccatcgta
ggaatcggagtaatgcaaattgtaggtgctgaaactttgattttagtcacaaacacactt
tctattcgtcaatggagaaatgaaattctggataaaacggatattcctcctgaagatata
ggagaatattctggcgaagtcaaagaaattcgtcctattacaattgctacatacaacatt
ctcactcatagaaagaaaaaaggcggagattttacccactttcatttattcggggccaat
aattggggattgatcgtttacgacgaggtacatttacttcctgcccctgtgtttagaatg
acttccgaacttcaggcaaaaagaagactcggtttgactgctactttggtaagagaagac
ggtttagaagaagacgtattctctctgattggacctaaaaaatatgacgttccttggaaa
gagttagaaagtaaatcttggattgcagaagcaaaatgtaaagaaattcgagttaatatg
gaagacgatcttcgtctgaaatattccattgcggacgatagagaaaagttcagactggct
tctgaaaatccagaaaagatgaaggcgattggtctcatcatgaaaaaacattccgagtct
catttgttagtaattggacagtatatcaatcaattggaagaaatatcaaagaaatttaat
attcctttgattacaggtaaaacccctcttccggaaagacaaacattgtatgacgcgttc
cgttccggtaaaatcaaatctcttgtagtgagtaaagtggcgaacttttcaatcgacttg
ccagatgccaatattgcgatccaggtttctggtacttttggttccagacaagaagaagca
cagagattaggtcgtattttgagacctaaaggtcacgataatactgccgtattttattct
cttatatccagagatacaaacgaagaacgttttggacaaaatcgtcagttgtttcttaca
gaacaaggatatgaatacgagatttataccttggaccagtttagagaagctcaagaagaa
ttggctcagttacaattgaataatgtctaa
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