Leptospira interrogans serovar Lai 56601: LA_2232
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Entry
LA_2232 CDS
T00098
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K03086
RNA polymerase primary sigma factor
Organism
lil
Leptospira interrogans serovar Lai 56601
Pathway
lil02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lil00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LA_2232 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lil03021
]
LA_2232 (rpoD)
Transcription machinery [BR:
lil03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LA_2232 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
Sigma70_r4_2
Exonuc_VII_L
TMPIT
PCRF
Bacillus_HBL
COG3_N
APG6_N
Motif
Other DBs
NCBI-ProteinID:
AAN49431
UniProt:
P59117
LinkDB
All DBs
Position
I:2212785..2214542
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AA seq
585 aa
AA seq
DB search
MENLQSMPEVQKIISLGKANGEVSYDDINEILPDKILNSEKIDDFFTLLHEMGIEIVEEY
TRNTLEPASTLVPKDDSKPARKKKESSASTSGSEDPIKLYLREIGKVSLISGETEVFLAK
RIEKGEKIIEETILSSSILRANYIKLLPKIRSKKIKVYDLIRVDKMYALNAEEAHKLEEL
FFKNILVIQEQEKVLQEAVSKIRKYSETSKKYKEFKEKIDASTEIIHNAIRELGVSQKEI
QKISQKIKSMVFRIKEIDRHFLKIKAQYGQDVRDIKAFNRFIEKNEKLDDIEVKMGVNID
EVREVIKDIRNNERKLRRMEQEAGSTVQEIKDWGEKIIKGEREISQAKKELVKANLRLVV
SIAKRYANRGMHFFDLIQEGNIGLIKAVDKFEYKKGYKFSTYATWWIRQAITRAISDQAR
TIRVPVHMIEQVNKVIRETRLFIQEFGRDPNNEEIAERLGWPVQKVKMVKNVAREPISLE
IPVGSEEDSELGDFIPDTEVETPVNAAASSILAEQIRQVLHTLPAREQKVIRMRFGLDDG
YPQTLEEVGYQFKVTRERIRQIEAKALRRLRHPSRSKKLKDYIDG
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatctacaaagtatgcccgaggttcaaaaaattatttccctcggaaaagcaaac
ggtgaagtttcttacgatgatattaacgaaatacttcccgataaaattctgaactcggaa
aagatagacgatttttttacactactgcacgagatgggaatcgaaatcgtagaagaatat
accagaaacactctggaacctgcttctactctcgttcctaaagacgattctaaaccagct
agaaagaaaaaagaatcctccgcttctacaagcggttccgaagatcccatcaaactttac
ttaagagaaatcggtaaggtaagtttgatttccggtgaaacagaggtttttttagcaaaa
agaattgaaaagggagaaaagattatcgaagagacaatcttaagttcctccattctcaga
gcgaattatattaaacttttacctaaaattcgaagtaagaagatcaaggtttatgatctg
attcgagttgataaaatgtatgctctcaacgcagaagaggctcataaactagaagaatta
ttttttaaaaacattttagtgattcaagaacaagagaaagttcttcaagaagcagtttct
aaaattagaaagtattctgaaacttctaaaaagtacaaggaatttaaagagaagatagac
gcttctacagaaatcatacacaacgcgattagagaacttggagtttcccaaaaagaaatt
caaaaaatttctcaaaagatcaagtccatggtttttagaatcaaggaaatagatcgtcat
tttttaaagatcaaagcacaatacggtcaagacgtccgagacatcaaagcgtttaatcgt
tttatcgaaaagaatgaaaagttagacgacatcgaagtcaagatgggagtcaacatagac
gaggttcgagaagttatcaaggacatccgaaacaacgaaagaaaacttcgtcgtatggaa
caagaagctggctccacagtccaagaaatcaaagactggggcgaaaaaatcatcaaaggg
gaaagggaaatttcccaagcaaaaaaggagctcgttaaagcaaaccttagactcgtggtt
tccatcgcaaaacgttatgcgaatcgtggtatgcacttcttcgatttaattcaagaagga
aacattggacttatcaaagcggtagataaattcgaatataaaaaaggttataaattttcc
acatacgctacttggtggattcgccaggcaattacacgtgcaatttccgatcaagcaaga
acgattcgagttccagttcacatgatcgaacaagtcaataaggtcattcgtgaaaccaga
ttgtttatccaagaatttggacgcgatccaaataacgaagagattgcagaaagacttggt
tggccggttcaaaaagtgaaaatggttaagaacgttgcgagggaaccaatttctttggaa
attcctgtgggctccgaagaagattcggaattgggagattttattccagatactgaagtg
gaaactcctgtaaatgcagcggcgtccagtattttagcggaacaaattcgccaagttctg
catacgttgcctgcgcgcgagcaaaaggtgattcggatgcgtttcggtttggacgacggt
tatcctcaaacgttggaagaagtaggctatcaattcaaagtgacaagagagaggattcgt
cagatcgaagcgaaggctcttcgaagactcagacatccgtctcgttctaagaagctgaag
gattatatcgacggttga
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