Leptospira interrogans serovar Lai 56601: LA_2404
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Entry
LA_2404 CDS
T00098
Symbol
rpoN
Name
(GenBank) DNA-directed RNA polymerase sigma-54 subunit
KO
K03092
RNA polymerase sigma-54 factor
Organism
lil
Leptospira interrogans serovar Lai 56601
Pathway
lil02020
Two-component system
lil02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lil00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LA_2404 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LA_2404 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lil03021
]
LA_2404 (rpoN)
Transcription machinery [BR:
lil03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LA_2404 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Sigma70_r4
HTH_IclR
MarR
HTH_3
Methyltransf_20
DUF5785
HTH_5
Motif
Other DBs
NCBI-ProteinID:
AAN49603
UniProt:
Q8F3J8
LinkDB
All DBs
Position
I:complement(2372597..2374018)
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AA seq
473 aa
AA seq
DB search
MNLSQSLVQKQTQKLVMTQDLRQSIELLPLSTLELSDRINSELVENPMLEEEYASERNRT
PDLYSRDDLKRKEKNDFLKNSDVSWQDHFSLDKAGGAGTDASDRNQKYIESSPEKSSLSE
HLLWQLRLSNLKPDEISIGEILISMLNDHGFIPIPIPDLCTEMKLNEKKVRKVLDQIHRL
DPIGIGAKDVQETLLIQAKILKPEDLNLHILIRDHIKDLEKLDYKSISKKMEIQLESVES
LASEIKKLEPYPATLYTPNKPDYVIPDVIVREVDGEFDIYINDEWIPRLKVNKEYKNILK
NAKESDKEYIATKLSSAEWLIRSVNQRRQTLFKVTSAIIEMQIAFFKKGIQHIRPLTLKD
IAEKLEMHESTISRITSNKYIQTSRGIMELKWFFSSGVRSTEGGIESSKKIHDLIRNLVK
EEQSDNPLSDQEIVDAIGKQGIEIARRTVAKYRKILKILPSSQRKKVKSLESR
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
gtgaatctaagtcagtcactggttcaaaaacaaacccaaaaacttgtgatgactcaggat
ctaagacagtccatagaacttctacctttgtctactttagaactttctgatagaatcaat
tccgaacttgtagaaaatcctatgttggaagaagaatatgcatcggaaagaaatagaacc
cccgatttatacagtagagacgatttaaaaagaaaagaaaaaaatgattttctcaaaaac
tcagacgttagttggcaagatcatttttctttagataaggccggaggcgcgggaaccgac
gcgtcagatcgaaatcagaaatacatagaatcctcaccggaaaaaagctccttatccgaa
catcttctttggcagcttaggctttccaatttaaaacctgatgaaatttccataggagaa
attttgatttccatgttgaatgatcatggatttattccgattccaattccagatttatgc
accgaaatgaagttgaatgagaaaaaagttcgtaaggtgttggatcagattcataggttg
gaccctatcggaattggagccaaggatgtacaagaaactcttctgatacaagccaagatt
ttaaaaccggaagatttaaatctacatattttaattcgggatcatattaaggatttagaa
aaattagattataagtctatttccaaaaaaatggaaatccagttagagtcggttgaatct
ctggcgtccgaaattaaaaagttagaaccttatcccgccacgttgtacactccaaataaa
ccggactatgtaattccagacgtgatcgtcagagaggtagacggggaatttgatatttat
atcaatgacgaatggattcctagacttaaagttaataaagaatataagaatattctaaaa
aatgcaaaagagtcagataaggaatatatcgctacaaaactaagttcggcggaatggttg
attcgttccgtaaatcaaagaagacaaactttgtttaaggtcacttcggcgattatagag
atgcaaattgcattttttaaaaaagggattcagcatattagaccactgactcttaaagac
attgctgaaaagttggaaatgcacgagtccacaatttccagaatcacttccaataaatat
attcagacttcgcgcggaattatggaattaaaatggttcttttcttccggggttcgttct
acggaaggtggaattgaatcttctaaaaaaatacacgatcttatccgaaacttagtcaaa
gaagaacaatcggacaatcctctttcggatcaagaaattgtagatgcaataggaaaacaa
ggaattgaaattgcaagaagaaccgtcgctaaatatagaaagattttgaaaatcctacca
tccagccagagaaaaaaagtcaagtctttggagtctagataa
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